Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
SLC6A20Q9NP91 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SLC6A20Q9NP91 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
SLC6A20Q9NP91 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
SLC6A20Q9NP91 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
SLC6A20Q9NP91 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.74■■□□□ 1.87
SLC6A20Q9NP91 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SLC6A20Q9NP91 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.74■■□□□ 1.87
SLC6A20Q9NP91 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SLC6A20Q9NP91 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.73■■□□□ 1.87
SLC6A20Q9NP91 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.72■■□□□ 1.87
SLC6A20Q9NP91 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
SLC6A20Q9NP91 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLC6A20Q9NP91 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.72■■□□□ 1.87
SLC6A20Q9NP91 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.7■■□□□ 1.86
SLC6A20Q9NP91 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC6A20Q9NP91 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC6A20Q9NP91 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SLC6A20Q9NP91 RARRES2P7-201ENST00000567349 469 ntBASIC26.68■■□□□ 1.86
SLC6A20Q9NP91 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.68■■□□□ 1.86
SLC6A20Q9NP91 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SLC6A20Q9NP91 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.67■■□□□ 1.86
SLC6A20Q9NP91 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.67■■□□□ 1.86
SLC6A20Q9NP91 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SLC6A20Q9NP91 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.65■■□□□ 1.86
SLC6A20Q9NP91 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLC6A20Q9NP91 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
SLC6A20Q9NP91 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.63■■□□□ 1.85
SLC6A20Q9NP91 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SLC6A20Q9NP91 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.62■■□□□ 1.85
SLC6A20Q9NP91 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SLC6A20Q9NP91 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SLC6A20Q9NP91 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SLC6A20Q9NP91 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SLC6A20Q9NP91 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC6A20Q9NP91 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SLC6A20Q9NP91 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.58■■□□□ 1.85
SLC6A20Q9NP91 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
SLC6A20Q9NP91 SETD8P1-201ENST00000623146 1180 ntBASIC26.55■■□□□ 1.84
SLC6A20Q9NP91 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SLC6A20Q9NP91 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SLC6A20Q9NP91 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SLC6A20Q9NP91 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SLC6A20Q9NP91 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SLC6A20Q9NP91 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
SLC6A20Q9NP91 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.52■■□□□ 1.84
SLC6A20Q9NP91 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.5■■□□□ 1.83
SLC6A20Q9NP91 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLC6A20Q9NP91 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLC6A20Q9NP91 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.46■■□□□ 1.83
SLC6A20Q9NP91 AL133380.1-201ENST00000506013 324 ntBASIC26.46■■□□□ 1.83
SLC6A20Q9NP91 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.46■■□□□ 1.83
SLC6A20Q9NP91 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
SLC6A20Q9NP91 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC6A20Q9NP91 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC6A20Q9NP91 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC6A20Q9NP91 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.43■■□□□ 1.82
SLC6A20Q9NP91 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC6A20Q9NP91 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.42■■□□□ 1.82
SLC6A20Q9NP91 AC136428.2-201ENST00000563187 214 ntBASIC26.41■■□□□ 1.82
SLC6A20Q9NP91 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.41■■□□□ 1.82
SLC6A20Q9NP91 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.39■■□□□ 1.82
SLC6A20Q9NP91 AC097358.2-201ENST00000607541 1159 ntBASIC26.38■■□□□ 1.81
SLC6A20Q9NP91 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.38■■□□□ 1.81
SLC6A20Q9NP91 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC6A20Q9NP91 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC6A20Q9NP91 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC6A20Q9NP91 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC6A20Q9NP91 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SLC6A20Q9NP91 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.35■■□□□ 1.81
SLC6A20Q9NP91 AC120057.4-201ENST00000624722 1615 ntBASIC26.35■■□□□ 1.81
SLC6A20Q9NP91 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.34■■□□□ 1.81
SLC6A20Q9NP91 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SLC6A20Q9NP91 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
SLC6A20Q9NP91 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SLC6A20Q9NP91 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.31■■□□□ 1.8
SLC6A20Q9NP91 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.31■■□□□ 1.8
SLC6A20Q9NP91 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.31■■□□□ 1.8
SLC6A20Q9NP91 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SLC6A20Q9NP91 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SLC6A20Q9NP91 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.29■■□□□ 1.8
SLC6A20Q9NP91 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC6A20Q9NP91 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.27■■□□□ 1.8
SLC6A20Q9NP91 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC6A20Q9NP91 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
SLC6A20Q9NP91 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.25■■□□□ 1.79
SLC6A20Q9NP91 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC6A20Q9NP91 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC6A20Q9NP91 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.24■■□□□ 1.79
SLC6A20Q9NP91 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC6A20Q9NP91 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC6A20Q9NP91 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
SLC6A20Q9NP91 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.23■■□□□ 1.79
SLC6A20Q9NP91 CAHM-201ENST00000604200 896 ntBASIC26.22■■□□□ 1.79
SLC6A20Q9NP91 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A20Q9NP91 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A20Q9NP91 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A20Q9NP91 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SLC6A20Q9NP91 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SLC6A20Q9NP91 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms