Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 RARRES2P7-201ENST00000567349 469 ntBASIC28.55■■■□□ 2.16
ATP13A1Q9HD20 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.16
ATP13A1Q9HD20 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ATP13A1Q9HD20 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
ATP13A1Q9HD20 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ATP13A1Q9HD20 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
ATP13A1Q9HD20 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.46■■■□□ 2.15
ATP13A1Q9HD20 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.45■■■□□ 2.14
ATP13A1Q9HD20 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ATP13A1Q9HD20 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
ATP13A1Q9HD20 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.41■■■□□ 2.14
ATP13A1Q9HD20 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ATP13A1Q9HD20 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.41■■■□□ 2.14
ATP13A1Q9HD20 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ATP13A1Q9HD20 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.4■■■□□ 2.14
ATP13A1Q9HD20 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.39■■■□□ 2.14
ATP13A1Q9HD20 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
ATP13A1Q9HD20 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ATP13A1Q9HD20 SETD8P1-201ENST00000623146 1180 ntBASIC28.37■■■□□ 2.13
ATP13A1Q9HD20 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
ATP13A1Q9HD20 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ATP13A1Q9HD20 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
ATP13A1Q9HD20 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ATP13A1Q9HD20 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ATP13A1Q9HD20 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP13A1Q9HD20 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ATP13A1Q9HD20 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC28.31■■■□□ 2.12
ATP13A1Q9HD20 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ATP13A1Q9HD20 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
ATP13A1Q9HD20 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.3■■■□□ 2.12
ATP13A1Q9HD20 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ATP13A1Q9HD20 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.28■■■□□ 2.12
ATP13A1Q9HD20 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
ATP13A1Q9HD20 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ATP13A1Q9HD20 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.27■■■□□ 2.12
ATP13A1Q9HD20 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ATP13A1Q9HD20 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ATP13A1Q9HD20 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
ATP13A1Q9HD20 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ATP13A1Q9HD20 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
ATP13A1Q9HD20 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ATP13A1Q9HD20 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
ATP13A1Q9HD20 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.24■■■□□ 2.11
ATP13A1Q9HD20 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.23■■■□□ 2.11
ATP13A1Q9HD20 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.22■■■□□ 2.11
ATP13A1Q9HD20 AC097358.2-201ENST00000607541 1159 ntBASIC28.22■■■□□ 2.11
ATP13A1Q9HD20 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ATP13A1Q9HD20 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ATP13A1Q9HD20 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ATP13A1Q9HD20 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ATP13A1Q9HD20 AL133380.1-201ENST00000506013 324 ntBASIC28.19■■■□□ 2.1
ATP13A1Q9HD20 AC136428.2-201ENST00000563187 214 ntBASIC28.18■■■□□ 2.1
ATP13A1Q9HD20 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.17■■■□□ 2.1
ATP13A1Q9HD20 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.17■■■□□ 2.1
ATP13A1Q9HD20 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ATP13A1Q9HD20 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.14■■■□□ 2.1
ATP13A1Q9HD20 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
ATP13A1Q9HD20 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.12■■■□□ 2.09
ATP13A1Q9HD20 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ATP13A1Q9HD20 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ATP13A1Q9HD20 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.11■■■□□ 2.09
ATP13A1Q9HD20 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ATP13A1Q9HD20 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.09■■■□□ 2.09
ATP13A1Q9HD20 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP13A1Q9HD20 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ATP13A1Q9HD20 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ATP13A1Q9HD20 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.08■■■□□ 2.08
ATP13A1Q9HD20 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ATP13A1Q9HD20 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.07■■■□□ 2.08
ATP13A1Q9HD20 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.07■■■□□ 2.08
ATP13A1Q9HD20 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ATP13A1Q9HD20 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.06■■■□□ 2.08
ATP13A1Q9HD20 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
ATP13A1Q9HD20 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.05■■■□□ 2.08
ATP13A1Q9HD20 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.05■■■□□ 2.08
ATP13A1Q9HD20 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ATP13A1Q9HD20 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
ATP13A1Q9HD20 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
ATP13A1Q9HD20 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.02■■■□□ 2.08
ATP13A1Q9HD20 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ATP13A1Q9HD20 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
ATP13A1Q9HD20 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
ATP13A1Q9HD20 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ATP13A1Q9HD20 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
ATP13A1Q9HD20 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
ATP13A1Q9HD20 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ATP13A1Q9HD20 CAHM-201ENST00000604200 896 ntBASIC27.96■■■□□ 2.07
ATP13A1Q9HD20 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ATP13A1Q9HD20 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
ATP13A1Q9HD20 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ATP13A1Q9HD20 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
ATP13A1Q9HD20 AL391121.1-201ENST00000607967 1349 ntBASIC27.92■■■□□ 2.06
ATP13A1Q9HD20 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
ATP13A1Q9HD20 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
ATP13A1Q9HD20 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.91■■■□□ 2.06
ATP13A1Q9HD20 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ATP13A1Q9HD20 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.9■■■□□ 2.06
ATP13A1Q9HD20 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
ATP13A1Q9HD20 SUZ12P1-203ENST00000578195 985 ntBASIC27.9■■■□□ 2.06
ATP13A1Q9HD20 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms