Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
PTCD3Q96EY7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PTCD3Q96EY7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.55■■■□□ 2
PTCD3Q96EY7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PTCD3Q96EY7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.53■■■□□ 2
PTCD3Q96EY7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PTCD3Q96EY7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PTCD3Q96EY7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD3Q96EY7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.49■■□□□ 1.99
PTCD3Q96EY7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD3Q96EY7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD3Q96EY7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
PTCD3Q96EY7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PTCD3Q96EY7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PTCD3Q96EY7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.45■■□□□ 1.98
PTCD3Q96EY7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PTCD3Q96EY7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PTCD3Q96EY7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.43■■□□□ 1.98
PTCD3Q96EY7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PTCD3Q96EY7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PTCD3Q96EY7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
PTCD3Q96EY7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
PTCD3Q96EY7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PTCD3Q96EY7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.38■■□□□ 1.97
PTCD3Q96EY7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.38■■□□□ 1.97
PTCD3Q96EY7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
PTCD3Q96EY7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PTCD3Q96EY7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PTCD3Q96EY7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.35■■□□□ 1.97
PTCD3Q96EY7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
PTCD3Q96EY7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PTCD3Q96EY7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.32■■□□□ 1.96
PTCD3Q96EY7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.32■■□□□ 1.96
PTCD3Q96EY7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PTCD3Q96EY7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PTCD3Q96EY7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PTCD3Q96EY7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PTCD3Q96EY7 ABCB10P1-201ENST00000614297 2181 ntBASIC27.27■■□□□ 1.96
PTCD3Q96EY7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PTCD3Q96EY7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PTCD3Q96EY7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PTCD3Q96EY7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCD3Q96EY7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PTCD3Q96EY7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCD3Q96EY7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.23■■□□□ 1.95
PTCD3Q96EY7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
PTCD3Q96EY7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PTCD3Q96EY7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PTCD3Q96EY7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PTCD3Q96EY7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PTCD3Q96EY7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PTCD3Q96EY7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PTCD3Q96EY7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
PTCD3Q96EY7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.16■■□□□ 1.94
PTCD3Q96EY7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PTCD3Q96EY7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PTCD3Q96EY7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PTCD3Q96EY7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PTCD3Q96EY7 ABCB10P3-201ENST00000561950 2166 ntBASIC27.15■■□□□ 1.94
PTCD3Q96EY7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.14■■□□□ 1.94
PTCD3Q96EY7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
PTCD3Q96EY7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PTCD3Q96EY7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.12■■□□□ 1.93
PTCD3Q96EY7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.12■■□□□ 1.93
PTCD3Q96EY7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
PTCD3Q96EY7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PTCD3Q96EY7 DYNLL1-208ENST00000550178 581 ntBASIC27.11■■□□□ 1.93
PTCD3Q96EY7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PTCD3Q96EY7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
PTCD3Q96EY7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PTCD3Q96EY7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PTCD3Q96EY7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PTCD3Q96EY7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PTCD3Q96EY7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PTCD3Q96EY7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PTCD3Q96EY7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
PTCD3Q96EY7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.08■■□□□ 1.93
PTCD3Q96EY7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PTCD3Q96EY7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.07■■□□□ 1.92
PTCD3Q96EY7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PTCD3Q96EY7 AP002365.1-201ENST00000603448 772 ntBASIC27.07■■□□□ 1.92
PTCD3Q96EY7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PTCD3Q96EY7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.06■■□□□ 1.92
PTCD3Q96EY7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PTCD3Q96EY7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
PTCD3Q96EY7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.04■■□□□ 1.92
PTCD3Q96EY7 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.04■■□□□ 1.92
PTCD3Q96EY7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.04■■□□□ 1.92
PTCD3Q96EY7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PTCD3Q96EY7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PTCD3Q96EY7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PTCD3Q96EY7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.01■■□□□ 1.91
PTCD3Q96EY7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.01■■□□□ 1.91
PTCD3Q96EY7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
PTCD3Q96EY7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27■■□□□ 1.91
PTCD3Q96EY7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27■■□□□ 1.91
PTCD3Q96EY7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
PTCD3Q96EY7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PTCD3Q96EY7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCD3Q96EY7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms