Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AL161658.1-201ENST00000623641 1967 ntBASIC18.15■□□□□ 0.5
SMIM11BQ8TCY0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM11BQ8TCY0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM11BQ8TCY0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM11BQ8TCY0 ABCB10P3-201ENST00000561950 2166 ntBASIC18.13■□□□□ 0.49
SMIM11BQ8TCY0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.12■□□□□ 0.49
SMIM11BQ8TCY0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM11BQ8TCY0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM11BQ8TCY0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM11BQ8TCY0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SMIM11BQ8TCY0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM11BQ8TCY0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SMIM11BQ8TCY0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM11BQ8TCY0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM11BQ8TCY0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM11BQ8TCY0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM11BQ8TCY0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM11BQ8TCY0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.08■□□□□ 0.49
SMIM11BQ8TCY0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SMIM11BQ8TCY0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.08■□□□□ 0.48
SMIM11BQ8TCY0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM11BQ8TCY0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SMIM11BQ8TCY0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM11BQ8TCY0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SMIM11BQ8TCY0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SMIM11BQ8TCY0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMIM11BQ8TCY0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.04■□□□□ 0.48
SMIM11BQ8TCY0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM11BQ8TCY0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMIM11BQ8TCY0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM11BQ8TCY0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM11BQ8TCY0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.03■□□□□ 0.48
SMIM11BQ8TCY0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMIM11BQ8TCY0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.03■□□□□ 0.48
SMIM11BQ8TCY0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMIM11BQ8TCY0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
SMIM11BQ8TCY0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SMIM11BQ8TCY0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM11BQ8TCY0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM11BQ8TCY0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMIM11BQ8TCY0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMIM11BQ8TCY0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMIM11BQ8TCY0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SMIM11BQ8TCY0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMIM11BQ8TCY0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SMIM11BQ8TCY0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.97■□□□□ 0.47
SMIM11BQ8TCY0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM11BQ8TCY0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SMIM11BQ8TCY0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM11BQ8TCY0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.97■□□□□ 0.47
SMIM11BQ8TCY0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMIM11BQ8TCY0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC17.96■□□□□ 0.47
SMIM11BQ8TCY0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM11BQ8TCY0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMIM11BQ8TCY0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SMIM11BQ8TCY0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM11BQ8TCY0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMIM11BQ8TCY0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SMIM11BQ8TCY0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM11BQ8TCY0 AC139426.1-201ENST00000568218 2529 ntBASIC17.88■□□□□ 0.45
SMIM11BQ8TCY0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM11BQ8TCY0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMIM11BQ8TCY0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SMIM11BQ8TCY0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM11BQ8TCY0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM11BQ8TCY0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
SMIM11BQ8TCY0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM11BQ8TCY0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC17.84■□□□□ 0.45
SMIM11BQ8TCY0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.84■□□□□ 0.45
SMIM11BQ8TCY0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM11BQ8TCY0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC17.84■□□□□ 0.45
SMIM11BQ8TCY0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM11BQ8TCY0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMIM11BQ8TCY0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM11BQ8TCY0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.81■□□□□ 0.44
SMIM11BQ8TCY0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM11BQ8TCY0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMIM11BQ8TCY0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM11BQ8TCY0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM11BQ8TCY0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SMIM11BQ8TCY0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMIM11BQ8TCY0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.78■□□□□ 0.44
SMIM11BQ8TCY0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
SMIM11BQ8TCY0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM11BQ8TCY0 AC120057.4-201ENST00000624722 1615 ntBASIC17.76■□□□□ 0.43
SMIM11BQ8TCY0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM11BQ8TCY0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM11BQ8TCY0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM11BQ8TCY0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM11BQ8TCY0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM11BQ8TCY0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM11BQ8TCY0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM11BQ8TCY0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SMIM11BQ8TCY0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SMIM11BQ8TCY0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMIM11BQ8TCY0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC17.72■□□□□ 0.43
SMIM11BQ8TCY0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM11BQ8TCY0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM11BQ8TCY0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SMIM11BQ8TCY0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms