Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.87■■■□□ 2.21
PCDH19Q8TAB3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.86■■■□□ 2.21
PCDH19Q8TAB3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCDH19Q8TAB3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCDH19Q8TAB3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.83■■■□□ 2.2
PCDH19Q8TAB3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCDH19Q8TAB3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
PCDH19Q8TAB3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PCDH19Q8TAB3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDH19Q8TAB3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.78■■■□□ 2.2
PCDH19Q8TAB3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDH19Q8TAB3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PCDH19Q8TAB3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.77■■■□□ 2.2
PCDH19Q8TAB3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PCDH19Q8TAB3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.75■■■□□ 2.19
PCDH19Q8TAB3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.73■■■□□ 2.19
PCDH19Q8TAB3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PCDH19Q8TAB3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCDH19Q8TAB3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
PCDH19Q8TAB3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCDH19Q8TAB3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
PCDH19Q8TAB3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
PCDH19Q8TAB3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
PCDH19Q8TAB3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
PCDH19Q8TAB3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDH19Q8TAB3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
PCDH19Q8TAB3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
PCDH19Q8TAB3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.65■■■□□ 2.18
PCDH19Q8TAB3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PCDH19Q8TAB3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH19Q8TAB3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.62■■■□□ 2.17
PCDH19Q8TAB3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
PCDH19Q8TAB3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDH19Q8TAB3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDH19Q8TAB3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PCDH19Q8TAB3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH19Q8TAB3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.57■■■□□ 2.16
PCDH19Q8TAB3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH19Q8TAB3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.56■■■□□ 2.16
PCDH19Q8TAB3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.55■■■□□ 2.16
PCDH19Q8TAB3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDH19Q8TAB3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.55■■■□□ 2.16
PCDH19Q8TAB3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.55■■■□□ 2.16
PCDH19Q8TAB3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.54■■■□□ 2.16
PCDH19Q8TAB3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCDH19Q8TAB3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PCDH19Q8TAB3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDH19Q8TAB3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCDH19Q8TAB3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PCDH19Q8TAB3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.51■■■□□ 2.15
PCDH19Q8TAB3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.51■■■□□ 2.15
PCDH19Q8TAB3 AC120057.4-201ENST00000624722 1615 ntBASIC28.51■■■□□ 2.15
PCDH19Q8TAB3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.5■■■□□ 2.15
PCDH19Q8TAB3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PCDH19Q8TAB3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.49■■■□□ 2.15
PCDH19Q8TAB3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PCDH19Q8TAB3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.47■■■□□ 2.15
PCDH19Q8TAB3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.47■■■□□ 2.15
PCDH19Q8TAB3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
PCDH19Q8TAB3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
PCDH19Q8TAB3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.15
PCDH19Q8TAB3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.44■■■□□ 2.14
PCDH19Q8TAB3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.44■■■□□ 2.14
PCDH19Q8TAB3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDH19Q8TAB3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDH19Q8TAB3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
PCDH19Q8TAB3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
PCDH19Q8TAB3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.42■■■□□ 2.14
PCDH19Q8TAB3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDH19Q8TAB3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.39■■■□□ 2.14
PCDH19Q8TAB3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PCDH19Q8TAB3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH19Q8TAB3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH19Q8TAB3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDH19Q8TAB3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDH19Q8TAB3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PCDH19Q8TAB3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDH19Q8TAB3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDH19Q8TAB3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PCDH19Q8TAB3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.32■■■□□ 2.12
PCDH19Q8TAB3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.32■■■□□ 2.12
PCDH19Q8TAB3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PCDH19Q8TAB3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.3■■■□□ 2.12
PCDH19Q8TAB3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDH19Q8TAB3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDH19Q8TAB3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDH19Q8TAB3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCDH19Q8TAB3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDH19Q8TAB3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PCDH19Q8TAB3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PCDH19Q8TAB3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDH19Q8TAB3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PCDH19Q8TAB3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.2■■■□□ 2.1
PCDH19Q8TAB3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDH19Q8TAB3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDH19Q8TAB3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PCDH19Q8TAB3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDH19Q8TAB3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.17■■■□□ 2.1
PCDH19Q8TAB3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PCDH19Q8TAB3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms