Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LSMEM1Q8N8F7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LSMEM1Q8N8F7 DYNLL1-208ENST00000550178 581 ntBASIC25.43■■□□□ 1.66
LSMEM1Q8N8F7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
LSMEM1Q8N8F7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
LSMEM1Q8N8F7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LSMEM1Q8N8F7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
LSMEM1Q8N8F7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
LSMEM1Q8N8F7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
LSMEM1Q8N8F7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
LSMEM1Q8N8F7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.37■■□□□ 1.65
LSMEM1Q8N8F7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LSMEM1Q8N8F7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.37■■□□□ 1.65
LSMEM1Q8N8F7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LSMEM1Q8N8F7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LSMEM1Q8N8F7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
LSMEM1Q8N8F7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LSMEM1Q8N8F7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LSMEM1Q8N8F7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.34■■□□□ 1.65
LSMEM1Q8N8F7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LSMEM1Q8N8F7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.31■■□□□ 1.64
LSMEM1Q8N8F7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LSMEM1Q8N8F7 AP002365.1-201ENST00000603448 772 ntBASIC25.3■■□□□ 1.64
LSMEM1Q8N8F7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
LSMEM1Q8N8F7 AL161658.1-201ENST00000623641 1967 ntBASIC25.29■■□□□ 1.64
LSMEM1Q8N8F7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.29■■□□□ 1.64
LSMEM1Q8N8F7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.29■■□□□ 1.64
LSMEM1Q8N8F7 AL031258.1-201ENST00000623562 325 ntBASIC25.29■■□□□ 1.64
LSMEM1Q8N8F7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM1Q8N8F7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM1Q8N8F7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM1Q8N8F7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
LSMEM1Q8N8F7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LSMEM1Q8N8F7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.26■■□□□ 1.63
LSMEM1Q8N8F7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
LSMEM1Q8N8F7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.26■■□□□ 1.63
LSMEM1Q8N8F7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.26■■□□□ 1.63
LSMEM1Q8N8F7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.26■■□□□ 1.63
LSMEM1Q8N8F7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.26■■□□□ 1.63
LSMEM1Q8N8F7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LSMEM1Q8N8F7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
LSMEM1Q8N8F7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
LSMEM1Q8N8F7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LSMEM1Q8N8F7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
LSMEM1Q8N8F7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LSMEM1Q8N8F7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.22■■□□□ 1.63
LSMEM1Q8N8F7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
LSMEM1Q8N8F7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.21■■□□□ 1.63
LSMEM1Q8N8F7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LSMEM1Q8N8F7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LSMEM1Q8N8F7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.21■■□□□ 1.63
LSMEM1Q8N8F7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.2■■□□□ 1.63
LSMEM1Q8N8F7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LSMEM1Q8N8F7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
LSMEM1Q8N8F7 AC120057.4-201ENST00000624722 1615 ntBASIC25.19■■□□□ 1.62
LSMEM1Q8N8F7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.18■■□□□ 1.62
LSMEM1Q8N8F7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LSMEM1Q8N8F7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.15■■□□□ 1.62
LSMEM1Q8N8F7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
LSMEM1Q8N8F7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.13■■□□□ 1.61
LSMEM1Q8N8F7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LSMEM1Q8N8F7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
LSMEM1Q8N8F7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.11■■□□□ 1.61
LSMEM1Q8N8F7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LSMEM1Q8N8F7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LSMEM1Q8N8F7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
LSMEM1Q8N8F7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
LSMEM1Q8N8F7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
LSMEM1Q8N8F7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.05■■□□□ 1.6
LSMEM1Q8N8F7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LSMEM1Q8N8F7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.03■■□□□ 1.6
LSMEM1Q8N8F7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LSMEM1Q8N8F7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LSMEM1Q8N8F7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LSMEM1Q8N8F7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LSMEM1Q8N8F7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LSMEM1Q8N8F7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.01■■□□□ 1.59
LSMEM1Q8N8F7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LSMEM1Q8N8F7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LSMEM1Q8N8F7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LSMEM1Q8N8F7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
LSMEM1Q8N8F7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
LSMEM1Q8N8F7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LSMEM1Q8N8F7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
LSMEM1Q8N8F7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.98■■□□□ 1.59
LSMEM1Q8N8F7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
LSMEM1Q8N8F7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
LSMEM1Q8N8F7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LSMEM1Q8N8F7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LSMEM1Q8N8F7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.94■■□□□ 1.58
LSMEM1Q8N8F7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
LSMEM1Q8N8F7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.93■■□□□ 1.58
LSMEM1Q8N8F7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LSMEM1Q8N8F7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LSMEM1Q8N8F7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
LSMEM1Q8N8F7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LSMEM1Q8N8F7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.91■■□□□ 1.58
LSMEM1Q8N8F7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
LSMEM1Q8N8F7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.91■■□□□ 1.58
LSMEM1Q8N8F7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms