Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.27■■■□□ 2.6
CCDC60Q8IWA6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.26■■■□□ 2.59
CCDC60Q8IWA6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC60Q8IWA6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.25■■■□□ 2.59
CCDC60Q8IWA6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC60Q8IWA6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC60Q8IWA6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC60Q8IWA6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC60Q8IWA6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
CCDC60Q8IWA6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.2■■■□□ 2.59
CCDC60Q8IWA6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.2■■■□□ 2.59
CCDC60Q8IWA6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.19■■■□□ 2.58
CCDC60Q8IWA6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC60Q8IWA6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC60Q8IWA6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.16■■■□□ 2.58
CCDC60Q8IWA6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC60Q8IWA6 AL133380.1-201ENST00000506013 324 ntBASIC31.13■■■□□ 2.57
CCDC60Q8IWA6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.13■■■□□ 2.57
CCDC60Q8IWA6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.13■■■□□ 2.57
CCDC60Q8IWA6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC60Q8IWA6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC60Q8IWA6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC60Q8IWA6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC60Q8IWA6 SUZ12P1-203ENST00000578195 985 ntBASIC31.09■■■□□ 2.57
CCDC60Q8IWA6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.07■■■□□ 2.56
CCDC60Q8IWA6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC60Q8IWA6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC60Q8IWA6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC60Q8IWA6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.04■■■□□ 2.56
CCDC60Q8IWA6 CAHM-201ENST00000604200 896 ntBASIC31.03■■■□□ 2.56
CCDC60Q8IWA6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.01■■■□□ 2.56
CCDC60Q8IWA6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CCDC60Q8IWA6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC60Q8IWA6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC60Q8IWA6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.98■■■□□ 2.55
CCDC60Q8IWA6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC60Q8IWA6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.97■■■□□ 2.55
CCDC60Q8IWA6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC60Q8IWA6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC60Q8IWA6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC60Q8IWA6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC60Q8IWA6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CCDC60Q8IWA6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CCDC60Q8IWA6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.93■■■□□ 2.54
CCDC60Q8IWA6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC60Q8IWA6 AL391121.1-201ENST00000607967 1349 ntBASIC30.93■■■□□ 2.54
CCDC60Q8IWA6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC60Q8IWA6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC60Q8IWA6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC60Q8IWA6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC60Q8IWA6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC60Q8IWA6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
CCDC60Q8IWA6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC60Q8IWA6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC60Q8IWA6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC60Q8IWA6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
CCDC60Q8IWA6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.83■■■□□ 2.53
CCDC60Q8IWA6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.83■■■□□ 2.53
CCDC60Q8IWA6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC60Q8IWA6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC60Q8IWA6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC60Q8IWA6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
CCDC60Q8IWA6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
CCDC60Q8IWA6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC60Q8IWA6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC60Q8IWA6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC60Q8IWA6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.75■■■□□ 2.51
CCDC60Q8IWA6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC60Q8IWA6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC60Q8IWA6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC60Q8IWA6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.73■■■□□ 2.51
CCDC60Q8IWA6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.73■■■□□ 2.51
CCDC60Q8IWA6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC60Q8IWA6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC60Q8IWA6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC60Q8IWA6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.68■■■□□ 2.5
CCDC60Q8IWA6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC60Q8IWA6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.68■■■□□ 2.5
CCDC60Q8IWA6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.67■■■□□ 2.5
CCDC60Q8IWA6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC60Q8IWA6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
CCDC60Q8IWA6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC60Q8IWA6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC60Q8IWA6 WASH5P-204ENST00000632292 975 ntBASIC30.61■■■□□ 2.49
CCDC60Q8IWA6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC60Q8IWA6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC60Q8IWA6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC60Q8IWA6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC60Q8IWA6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC60Q8IWA6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC60Q8IWA6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC60Q8IWA6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC60Q8IWA6 RPS2P35-201ENST00000443417 897 ntBASIC30.57■■■□□ 2.48
CCDC60Q8IWA6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC60Q8IWA6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC60Q8IWA6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.57■■■□□ 2.48
CCDC60Q8IWA6 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.56■■■□□ 2.48
CCDC60Q8IWA6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.55■■■□□ 2.48
CCDC60Q8IWA6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC60Q8IWA6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms