Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
CHD1LQ86WJ1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
CHD1LQ86WJ1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
CHD1LQ86WJ1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CHD1LQ86WJ1 DYNLL1-208ENST00000550178 581 ntBASIC34.53■■■■□ 3.12
CHD1LQ86WJ1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC34.53■■■■□ 3.12
CHD1LQ86WJ1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC34.52■■■■□ 3.12
CHD1LQ86WJ1 MVK-208ENST00000539696 608 ntTSL 5 BASIC34.52■■■■□ 3.12
CHD1LQ86WJ1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
CHD1LQ86WJ1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC34.51■■■■□ 3.12
CHD1LQ86WJ1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC34.51■■■■□ 3.12
CHD1LQ86WJ1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC34.51■■■■□ 3.12
CHD1LQ86WJ1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.11
CHD1LQ86WJ1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC34.5■■■■□ 3.11
CHD1LQ86WJ1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CHD1LQ86WJ1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC34.48■■■■□ 3.11
CHD1LQ86WJ1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CHD1LQ86WJ1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC34.47■■■■□ 3.11
CHD1LQ86WJ1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
CHD1LQ86WJ1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CHD1LQ86WJ1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC34.44■■■■□ 3.1
CHD1LQ86WJ1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
CHD1LQ86WJ1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
CHD1LQ86WJ1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC34.4■■■■□ 3.1
CHD1LQ86WJ1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CHD1LQ86WJ1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CHD1LQ86WJ1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
CHD1LQ86WJ1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CHD1LQ86WJ1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
CHD1LQ86WJ1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC34.35■■■■□ 3.09
CHD1LQ86WJ1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
CHD1LQ86WJ1 AL031258.1-201ENST00000623562 325 ntBASIC34.33■■■■□ 3.09
CHD1LQ86WJ1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
CHD1LQ86WJ1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
CHD1LQ86WJ1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC34.31■■■■□ 3.08
CHD1LQ86WJ1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CHD1LQ86WJ1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC34.31■■■■□ 3.08
CHD1LQ86WJ1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC34.31■■■■□ 3.08
CHD1LQ86WJ1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
CHD1LQ86WJ1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC34.29■■■■□ 3.08
CHD1LQ86WJ1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CHD1LQ86WJ1 AP002365.1-201ENST00000603448 772 ntBASIC34.28■■■■□ 3.08
CHD1LQ86WJ1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC34.28■■■■□ 3.08
CHD1LQ86WJ1 AC120057.4-201ENST00000624722 1615 ntBASIC34.26■■■■□ 3.08
CHD1LQ86WJ1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
CHD1LQ86WJ1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC34.26■■■■□ 3.08
CHD1LQ86WJ1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
CHD1LQ86WJ1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CHD1LQ86WJ1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CHD1LQ86WJ1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC34.23■■■■□ 3.07
CHD1LQ86WJ1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC34.23■■■■□ 3.07
CHD1LQ86WJ1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.23■■■■□ 3.07
CHD1LQ86WJ1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC34.22■■■■□ 3.07
CHD1LQ86WJ1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC34.21■■■■□ 3.07
CHD1LQ86WJ1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
CHD1LQ86WJ1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC34.19■■■■□ 3.06
CHD1LQ86WJ1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
CHD1LQ86WJ1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC34.16■■■■□ 3.06
CHD1LQ86WJ1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
CHD1LQ86WJ1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
CHD1LQ86WJ1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.12■■■■□ 3.05
CHD1LQ86WJ1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC34.1■■■■□ 3.05
CHD1LQ86WJ1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CHD1LQ86WJ1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC34.07■■■■□ 3.04
CHD1LQ86WJ1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
CHD1LQ86WJ1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC34.01■■■■□ 3.04
CHD1LQ86WJ1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC34.01■■■■□ 3.04
CHD1LQ86WJ1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
CHD1LQ86WJ1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34■■■■□ 3.03
CHD1LQ86WJ1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CHD1LQ86WJ1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC33.99■■■■□ 3.03
CHD1LQ86WJ1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
CHD1LQ86WJ1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.98■■■■□ 3.03
CHD1LQ86WJ1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
CHD1LQ86WJ1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
CHD1LQ86WJ1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC33.94■■■■□ 3.02
CHD1LQ86WJ1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC33.94■■■■□ 3.02
CHD1LQ86WJ1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC33.94■■■■□ 3.02
CHD1LQ86WJ1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
CHD1LQ86WJ1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC33.93■■■■□ 3.02
CHD1LQ86WJ1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
CHD1LQ86WJ1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC33.93■■■■□ 3.02
CHD1LQ86WJ1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
CHD1LQ86WJ1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC33.92■■■■□ 3.02
CHD1LQ86WJ1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
CHD1LQ86WJ1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
CHD1LQ86WJ1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC33.9■■■■□ 3.02
CHD1LQ86WJ1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC33.89■■■■□ 3.02
CHD1LQ86WJ1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
CHD1LQ86WJ1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.88■■■■□ 3.01
CHD1LQ86WJ1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
CHD1LQ86WJ1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.86■■■■□ 3.01
CHD1LQ86WJ1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
CHD1LQ86WJ1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
CHD1LQ86WJ1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
CHD1LQ86WJ1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC33.82■■■■□ 3
CHD1LQ86WJ1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC33.82■■■■□ 3
CHD1LQ86WJ1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
CHD1LQ86WJ1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
CHD1LQ86WJ1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC33.79■■■■□ 3
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms