Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC087741.3-201ENST00000624270 1347 ntBASIC25.34■■□□□ 1.65
LRRK2Q5S007 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.34■■□□□ 1.65
LRRK2Q5S007 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRK2Q5S007 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
LRRK2Q5S007 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRK2Q5S007 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LRRK2Q5S007 AC044849.2-201ENST00000606596 710 ntBASIC25.26■■□□□ 1.63
LRRK2Q5S007 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LRRK2Q5S007 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.25■■□□□ 1.63
LRRK2Q5S007 MIR4449-201ENST00000578365 66 ntBASIC25.24■■□□□ 1.63
LRRK2Q5S007 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.23■■□□□ 1.63
LRRK2Q5S007 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.22■■□□□ 1.63
LRRK2Q5S007 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRK2Q5S007 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.21■■□□□ 1.63
LRRK2Q5S007 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.19■■□□□ 1.62
LRRK2Q5S007 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.19■■□□□ 1.62
LRRK2Q5S007 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
LRRK2Q5S007 DUX4L28-201ENST00000623687 678 ntBASIC25.19■■□□□ 1.62
LRRK2Q5S007 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRRK2Q5S007 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
LRRK2Q5S007 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.17■■□□□ 1.62
LRRK2Q5S007 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.17■■□□□ 1.62
LRRK2Q5S007 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.15■■□□□ 1.62
LRRK2Q5S007 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
LRRK2Q5S007 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.14■■□□□ 1.61
LRRK2Q5S007 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.14■■□□□ 1.61
LRRK2Q5S007 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
LRRK2Q5S007 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.11■■□□□ 1.61
LRRK2Q5S007 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
LRRK2Q5S007 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
LRRK2Q5S007 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
LRRK2Q5S007 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRK2Q5S007 MIR762-201ENST00000390236 83 ntBASIC25.09■■□□□ 1.61
LRRK2Q5S007 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LRRK2Q5S007 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LRRK2Q5S007 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LRRK2Q5S007 AC005559.1-201ENST00000589661 871 ntBASIC25.04■■□□□ 1.6
LRRK2Q5S007 AL133380.1-201ENST00000506013 324 ntBASIC25.03■■□□□ 1.6
LRRK2Q5S007 AC145285.7-201ENST00000614819 1539 ntBASIC25.03■■□□□ 1.6
LRRK2Q5S007 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.03■■□□□ 1.6
LRRK2Q5S007 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.03■■□□□ 1.6
LRRK2Q5S007 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRK2Q5S007 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
LRRK2Q5S007 HSD17B1P1-201ENST00000590052 955 ntBASIC25■■□□□ 1.59
LRRK2Q5S007 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25■■□□□ 1.59
LRRK2Q5S007 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC25■■□□□ 1.59
LRRK2Q5S007 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.99■■□□□ 1.59
LRRK2Q5S007 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LRRK2Q5S007 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.98■■□□□ 1.59
LRRK2Q5S007 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.97■■□□□ 1.59
LRRK2Q5S007 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
LRRK2Q5S007 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.59
LRRK2Q5S007 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.95■■□□□ 1.59
LRRK2Q5S007 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.94■■□□□ 1.58
LRRK2Q5S007 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LRRK2Q5S007 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.93■■□□□ 1.58
LRRK2Q5S007 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LRRK2Q5S007 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
LRRK2Q5S007 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRK2Q5S007 MIR639-201ENST00000384974 98 ntBASIC24.9■■□□□ 1.58
LRRK2Q5S007 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
LRRK2Q5S007 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.88■■□□□ 1.57
LRRK2Q5S007 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.88■■□□□ 1.57
LRRK2Q5S007 ZNRF2P2-203ENST00000454624 420 ntBASIC24.87■■□□□ 1.57
LRRK2Q5S007 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
LRRK2Q5S007 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LRRK2Q5S007 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRRK2Q5S007 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.85■■□□□ 1.57
LRRK2Q5S007 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRRK2Q5S007 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LRRK2Q5S007 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
LRRK2Q5S007 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.84■■□□□ 1.57
LRRK2Q5S007 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.83■■□□□ 1.57
LRRK2Q5S007 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
LRRK2Q5S007 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LRRK2Q5S007 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRK2Q5S007 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
LRRK2Q5S007 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.79■■□□□ 1.56
LRRK2Q5S007 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.79■■□□□ 1.56
LRRK2Q5S007 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.79■■□□□ 1.56
LRRK2Q5S007 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.78■■□□□ 1.56
LRRK2Q5S007 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
LRRK2Q5S007 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
LRRK2Q5S007 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
LRRK2Q5S007 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.75■■□□□ 1.55
LRRK2Q5S007 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LRRK2Q5S007 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.74■■□□□ 1.55
LRRK2Q5S007 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
LRRK2Q5S007 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.73■■□□□ 1.55
LRRK2Q5S007 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LRRK2Q5S007 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LRRK2Q5S007 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
LRRK2Q5S007 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
LRRK2Q5S007 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.67■■□□□ 1.54
LRRK2Q5S007 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRK2Q5S007 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.65■■□□□ 1.54
LRRK2Q5S007 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LRRK2Q5S007 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.64■■□□□ 1.54
LRRK2Q5S007 MIR3648-2-201ENST00000581792 180 ntBASIC24.63■■□□□ 1.53
LRRK2Q5S007 MIR3648-1-201ENST00000615959 180 ntBASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms