Protein–RNA interactions for Protein: Q06787

FMR1, Synaptic functional regulator FMR1, humanhuman

Known RBP eCLIP

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1Q06787 PABPC1L-216ENST00000490798 1384 ntTSL 323.66■■□□□ 1.384e-11■■■■■ 70.3
FMR1Q06787 PABPC1L-205ENST00000372819 2100 ntTSL 2 BASIC14.2□□□□□ -0.144e-11■■■■■ 70.3
FMR1Q06787 PABPC1L-208ENST00000372826 854 ntTSL 512.31□□□□□ -0.444e-11■■■■■ 70.3
FMR1Q06787 SMCHD1-203ENST00000577880 4951 ntTSL 22.98□□□□□ -1.933e-7■■■■■ 70.1
FMR1Q06787 SMCHD1-211ENST00000584897 4143 ntTSL 22.7□□□□□ -1.983e-7■■■■■ 70.1
FMR1Q06787 SVIL-AS1-205ENST00000430295 440 ntTSL 227.54■■■□□ 25e-20■■■■■ 70
FMR1Q06787 WWOX-215ENST00000569332 1856 ntTSL 226.87■■□□□ 1.896e-12■■■■■ 70
FMR1Q06787 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.18■■□□□ 1.36e-12■■■■■ 70
FMR1Q06787 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.73■■□□□ 1.236e-12■■■■■ 70
FMR1Q06787 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.38■■□□□ 1.016e-12■■■■■ 70
FMR1Q06787 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.986e-12■■■■■ 70
FMR1Q06787 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.93■□□□□ 0.946e-12■■■■■ 70
FMR1Q06787 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.64■□□□□ 0.735e-20■■■■■ 70
FMR1Q06787 SVIL-AS1-201ENST00000413405 767 ntTSL 1 (best)17.94■□□□□ 0.465e-20■■■■■ 70
FMR1Q06787 SVIL-AS1-207ENST00000445521 188 ntTSL 412.66□□□□□ -0.385e-20■■■■■ 70
FMR1Q06787 SVIL-AS1-206ENST00000438202 652 ntTSL 212.19□□□□□ -0.465e-20■■■■■ 70
FMR1Q06787 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC9.51□□□□□ -0.895e-20■■■■■ 70
FMR1Q06787 SVIL-AS1-203ENST00000423223 507 ntTSL 28.89□□□□□ -0.995e-20■■■■■ 70
FMR1Q06787 SVIL-AS1-209ENST00000455774 478 ntTSL 35.08□□□□□ -1.65e-20■■■■■ 70
FMR1Q06787 CR1L-201ENST00000294997 1587 ntTSL 1 (best)9.55□□□□□ -0.882e-13■■■■■ 69.7
FMR1Q06787 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.53□□□□□ -1.22e-18■■■■■ 69
FMR1Q06787 CDK6-204ENST00000473078 386 ntTSL 22.79□□□□□ -1.962e-8■■■■■ 68.9
FMR1Q06787 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.79■□□□□ 0.125e-7■■■■■ 68.9
FMR1Q06787 USP6NL-201ENST00000277575 4512 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.489e-9■■■■■ 68.7
FMR1Q06787 ZNF638-219ENST00000487638 4233 ntTSL 1 (best)3.13□□□□□ -1.914e-9■■■■■ 68.1
FMR1Q06787 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.552e-19■■■■■ 68
FMR1Q06787 ACIN1-214ENST00000555352 579 ntTSL 411.62□□□□□ -0.552e-19■■■■■ 68
FMR1Q06787 ME2-205ENST00000591925 2092 ntTSL 28.42□□□□□ -1.062e-19■■■■■ 68
FMR1Q06787 ME2-212ENST00000639612 1281 ntTSL 57.69□□□□□ -1.182e-19■■■■■ 68
FMR1Q06787 ME2-203ENST00000585680 1792 ntTSL 56.98□□□□□ -1.292e-19■■■■■ 68
FMR1Q06787 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.34e-34■■■■■ 67
FMR1Q06787 HPCAL1-205ENST00000423674 586 ntTSL 428.84■■■□□ 2.214e-19■■■■■ 66.9
FMR1Q06787 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.564e-19■■■■■ 66.9
FMR1Q06787 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.474e-19■■■■■ 66.9
FMR1Q06787 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC39.62■■■■□ 3.933e-11■■■■■ 66.2
FMR1Q06787 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC36.88■■■■□ 3.53e-11■■■■■ 66.2
FMR1Q06787 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.81■■■□□ 2.843e-11■■■■■ 66.2
FMR1Q06787 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.973e-11■■■■■ 66.2
FMR1Q06787 CSNK1E-208ENST00000431611 814 ntTSL 519.66■□□□□ 0.743e-11■■■■■ 66.2
FMR1Q06787 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.513e-11■■■■■ 66.2
FMR1Q06787 CSNK1E-209ENST00000431632 763 ntTSL 217.65■□□□□ 0.423e-11■■■■■ 66.2
FMR1Q06787 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.133e-11■■■■■ 66.2
FMR1Q06787 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.098e-19■■■■■ 65.9
FMR1Q06787 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.368e-19■■■■■ 65.9
FMR1Q06787 CLASP1-212ENST00000480007 569 ntTSL 411.57□□□□□ -0.568e-19■■■■■ 65.9
FMR1Q06787 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.568e-19■■■■■ 65.9
FMR1Q06787 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC10.5□□□□□ -0.738e-19■■■■■ 65.9
FMR1Q06787 CLASP1-206ENST00000449975 555 ntTSL 410.32□□□□□ -0.768e-19■■■■■ 65.9
FMR1Q06787 CLASP1-207ENST00000452274 3966 ntTSL 59.76□□□□□ -0.858e-19■■■■■ 65.9
FMR1Q06787 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.99□□□□□ -0.978e-19■■■■■ 65.9
FMR1Q06787 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.988e-19■■■■■ 65.9
FMR1Q06787 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC8.89□□□□□ -0.998e-19■■■■■ 65.9
FMR1Q06787 CLASP1-211ENST00000474065 516 ntTSL 38.77□□□□□ -1.018e-19■■■■■ 65.9
FMR1Q06787 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.72□□□□□ -1.018e-19■■■■■ 65.9
FMR1Q06787 CLASP1-205ENST00000430234 582 ntTSL 48.37□□□□□ -1.078e-19■■■■■ 65.9
FMR1Q06787 CLASP1-204ENST00000418989 663 ntTSL 47.49□□□□□ -1.218e-19■■■■■ 65.9
FMR1Q06787 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.372e-6■■■■■ 65.9
FMR1Q06787 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.072e-6■■■■■ 65.9
FMR1Q06787 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.012e-6■■■■■ 65.9
FMR1Q06787 COG5-208ENST00000475638 592 ntTSL 37.6□□□□□ -1.192e-6■■■■■ 65.9
FMR1Q06787 HNRNPR-213ENST00000641107 646 nt17.38■□□□□ 0.376e-7■■■■■ 65
FMR1Q06787 VPS53-210ENST00000571456 744 ntTSL 325.88■■□□□ 1.732e-18■■■■■ 64.9
FMR1Q06787 AL136531.2-201ENST00000618770 1164 ntTSL 223.04■■□□□ 1.282e-18■■■■■ 64.9
FMR1Q06787 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.762e-18■■■■■ 64.9
FMR1Q06787 VPS53-207ENST00000570510 570 ntTSL 414.98□□□□□ -0.012e-18■■■■■ 64.9
FMR1Q06787 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.072e-6■■■■■ 64.6
FMR1Q06787 RAD51B-205ENST00000471583 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.461e-16■■■■■ 64.4
FMR1Q06787 RAD51B-208ENST00000479335 1615 ntTSL 1 (best)11.06□□□□□ -0.641e-16■■■■■ 64.4
FMR1Q06787 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC9.63□□□□□ -0.871e-16■■■■■ 64.4
FMR1Q06787 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC9.23□□□□□ -0.931e-16■■■■■ 64.4
FMR1Q06787 RAD51B-204ENST00000469165 1158 ntTSL 39.01□□□□□ -0.971e-16■■■■■ 64.4
FMR1Q06787 RAD51B-202ENST00000460526 794 ntTSL 39.01□□□□□ -0.971e-16■■■■■ 64.4
FMR1Q06787 RAD51B-203ENST00000468382 829 ntTSL 58.6□□□□□ -1.031e-16■■■■■ 64.4
FMR1Q06787 RAD51B-207ENST00000478014 618 ntTSL 37.88□□□□□ -1.151e-16■■■■■ 64.4
FMR1Q06787 RAD51B-214ENST00000497460 546 ntTSL 47.66□□□□□ -1.181e-16■■■■■ 64.4
FMR1Q06787 RAD51B-213ENST00000492236 417 ntTSL 37.63□□□□□ -1.191e-16■■■■■ 64.4
FMR1Q06787 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.6□□□□□ -1.191e-16■■■■■ 64.4
FMR1Q06787 RAD51B-216ENST00000553595 795 ntTSL 36.76□□□□□ -1.331e-16■■■■■ 64.4
FMR1Q06787 RAD51B-219ENST00000554244 669 ntTSL 36.69□□□□□ -1.341e-16■■■■■ 64.4
FMR1Q06787 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.27■■□□□ 1.643e-18■■■■■ 63.8
FMR1Q06787 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.29■■□□□ 1.483e-18■■■■■ 63.8
FMR1Q06787 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.443e-18■■■■■ 63.8
FMR1Q06787 TMEM64-206ENST00000521852 587 ntTSL 423.76■■□□□ 1.393e-18■■■■■ 63.8
FMR1Q06787 TMEM64-202ENST00000422900 1174 ntTSL 219.95■□□□□ 0.783e-18■■■■■ 63.8
FMR1Q06787 MBNL1-208ENST00000460166 552 ntTSL 411.31□□□□□ -0.63e-18■■■■■ 63.8
FMR1Q06787 MBNL1-216ENST00000478535 1451 ntTSL 1 (best)9.12□□□□□ -0.953e-18■■■■■ 63.8
FMR1Q06787 GPATCH8-209ENST00000592154 650 ntTSL 212.3□□□□□ -0.445e-13■■■■■ 63.4
FMR1Q06787 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.625e-13■■■■■ 63.4
FMR1Q06787 GPATCH8-202ENST00000585614 686 ntTSL 311.15□□□□□ -0.625e-13■■■■■ 63.4
FMR1Q06787 GPATCH8-205ENST00000587228 4713 ntTSL 1 (best)10.36□□□□□ -0.755e-13■■■■■ 63.4
FMR1Q06787 GPATCH8-206ENST00000588554 565 ntTSL 29.88□□□□□ -0.835e-13■■■■■ 63.4
FMR1Q06787 GPATCH8-207ENST00000590041 829 ntTSL 58.76□□□□□ -1.015e-13■■■■■ 63.4
FMR1Q06787 GPATCH8-210ENST00000592746 457 ntTSL 56.24□□□□□ -1.415e-13■■■■■ 63.4
FMR1Q06787 GPATCH8-203ENST00000586037 345 ntTSL 55.58□□□□□ -1.525e-13■■■■■ 63.4
FMR1Q06787 IWS1-203ENST00000412979 441 ntTSL 312.91□□□□□ -0.347e-8■■■■■ 63.3
FMR1Q06787 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.7■□□□□ 0.266e-18■■■■■ 62.8
FMR1Q06787 ZDHHC3-207ENST00000443879 407 ntTSL 515.18■□□□□ 0.026e-18■■■■■ 62.8
FMR1Q06787 ZDHHC3-202ENST00000339420 3226 ntTSL 211.82□□□□□ -0.526e-18■■■■■ 62.8
FMR1Q06787 RPRD1A-204ENST00000585953 2357 ntTSL 34.38□□□□□ -1.716e-18■■■■■ 62.8
FMR1Q06787 RPRD1A-210ENST00000591994 2484 ntTSL 24.19□□□□□ -1.746e-18■■■■■ 62.8
Retrieved 100 of 13,491 protein–RNA pairs in 31 ms