RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 NISCHQ9Y2I1 1504 aa37.85■■■■□ 3.65
CSNK1E-208ENST00000431611 ABCC9O60706 1549 aa33.99■■■■□ 3.03
CSNK1E-208ENST00000431611 CCDC180Q9P1Z9 1646 aa33.89■■■■□ 3.02
CSNK1E-208ENST00000431611 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.76
CSNK1E-208ENST00000431611 NACADO15069 1562 aa32.11■■■□□ 2.73
CSNK1E-208ENST00000431611 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
CSNK1E-208ENST00000431611 DNAJC5BQ9UF47 199 aa31.91■■■□□ 2.7
CSNK1E-208ENST00000431611 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
CSNK1E-208ENST00000431611 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
CSNK1E-208ENST00000431611 UNC13AQ9UPW8 1703 aa31.46■■■□□ 2.63
CSNK1E-208ENST00000431611 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
CSNK1E-208ENST00000431611 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
CSNK1E-208ENST00000431611 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
CSNK1E-208ENST00000431611 SHROOM4Q9ULL8 1493 aa30.96■■■□□ 2.55
CSNK1E-208ENST00000431611 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
CSNK1E-208ENST00000431611 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
CSNK1E-208ENST00000431611 CECR2Q9BXF3 1484 aa30.62■■■□□ 2.49
CSNK1E-208ENST00000431611 EIF4G1Q04637 1599 aaKnown RBP30.61■■■□□ 2.49
CSNK1E-208ENST00000431611 NCAPD3P42695 1498 aa29.67■■■□□ 2.34
CSNK1E-208ENST00000431611 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
CSNK1E-208ENST00000431611 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
CSNK1E-208ENST00000431611 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
CSNK1E-208ENST00000431611 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
CSNK1E-208ENST00000431611 BAZ1AQ9NRL2 1556 aaPredicted RBP29.38■■■□□ 2.29
CSNK1E-208ENST00000431611 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
CSNK1E-208ENST00000431611 DNAJC5Q9H3Z4 198 aa29.31■■■□□ 2.28
CSNK1E-208ENST00000431611 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
CSNK1E-208ENST00000431611 CUX2O14529 1486 aa29.28■■■□□ 2.28
CSNK1E-208ENST00000431611 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
CSNK1E-208ENST00000431611 NESP48681 1621 aa29.18■■■□□ 2.26
CSNK1E-208ENST00000431611 MROH2BQ7Z745 1585 aa29.17■■■□□ 2.26
CSNK1E-208ENST00000431611 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
CSNK1E-208ENST00000431611 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
CSNK1E-208ENST00000431611 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
CSNK1E-208ENST00000431611 CADPSQ9ULU8 1353 aa28.78■■■□□ 2.2
CSNK1E-208ENST00000431611 WIZO95785 1651 aa28.77■■■□□ 2.2
CSNK1E-208ENST00000431611 KIF21AQ7Z4S6 1674 aa28.73■■■□□ 2.19
CSNK1E-208ENST00000431611 RSF1Q96T23 1441 aaPredicted RBP28.59■■■□□ 2.17
CSNK1E-208ENST00000431611 MRC2Q9UBG0 1479 aa28.58■■■□□ 2.17
CSNK1E-208ENST00000431611 WDR62O43379 1518 aa28.48■■■□□ 2.15
CSNK1E-208ENST00000431611 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
CSNK1E-208ENST00000431611 TOP2AP11388 1531 aaKnown RBP28.44■■■□□ 2.14
CSNK1E-208ENST00000431611 CFTRP13569 1480 aa28.44■■■□□ 2.14
CSNK1E-208ENST00000431611 FANCD2Q9BXW9 1451 aa28.44■■■□□ 2.14
CSNK1E-208ENST00000431611 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
CSNK1E-208ENST00000431611 CCDC88BA6NC98 1476 aa28.15■■■□□ 2.1
CSNK1E-208ENST00000431611 TRIM41Q8WV44 630 aa28.05■■■□□ 2.08
CSNK1E-208ENST00000431611 OSCARQ8IYS5 282 aa28.01■■■□□ 2.07
CSNK1E-208ENST00000431611 PRDM2Q13029 1718 aa28■■■□□ 2.07
CSNK1E-208ENST00000431611 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
CSNK1E-208ENST00000431611 TOPBP1Q92547 1522 aa27.88■■■□□ 2.05
CSNK1E-208ENST00000431611 ZNF608Q9ULD9 1512 aaPredicted RBP27.85■■■□□ 2.05
CSNK1E-208ENST00000431611 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
CSNK1E-208ENST00000431611 DNMBPQ6XZF7 1577 aa27.76■■■□□ 2.03
CSNK1E-208ENST00000431611 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
CSNK1E-208ENST00000431611 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.015e-7■■■■■ 31.6
CSNK1E-208ENST00000431611 POLA1P09884 1462 aaPredicted RBP27.61■■■□□ 2.01
CSNK1E-208ENST00000431611 TARBP1Q13395 1621 aaKnown RBP27.6■■■□□ 2.01
CSNK1E-208ENST00000431611 RIMBP3CA6NJZ7 1639 aa27.54■■■□□ 2
CSNK1E-208ENST00000431611 RIMBP3BA6NNM3 1639 aa27.54■■■□□ 2
CSNK1E-208ENST00000431611 RIMBP3Q9UFD9 1639 aa27.54■■■□□ 2
CSNK1E-208ENST00000431611 RAD54L2Q9Y4B4 1467 aa27.51■■■□□ 2
CSNK1E-208ENST00000431611 SOGA1O94964 1423 aa27.51■■□□□ 1.99
CSNK1E-208ENST00000431611 FBLN2P98095 1184 aa27.49■■□□□ 1.99
CSNK1E-208ENST00000431611 ARHGEF11O15085 1522 aa27.49■■□□□ 1.99
CSNK1E-208ENST00000431611 TDRD9Q8NDG6 1382 aaKnown RBP27.47■■□□□ 1.99
CSNK1E-208ENST00000431611 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
CSNK1E-208ENST00000431611 CHD1O14646 1710 aa27.39■■□□□ 1.98
CSNK1E-208ENST00000431611 CUX1P39880 1505 aa27.39■■□□□ 1.98
CSNK1E-208ENST00000431611 SUPT5HO00267 1087 aaKnown RBP27.38■■□□□ 1.97
CSNK1E-208ENST00000431611 CYB5RLQ6IPT4 315 aa27.36■■□□□ 1.97
CSNK1E-208ENST00000431611 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
CSNK1E-208ENST00000431611 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
CSNK1E-208ENST00000431611 CHMP7Q8WUX9 453 aaPredicted RBP27.28■■□□□ 1.96
CSNK1E-208ENST00000431611 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
CSNK1E-208ENST00000431611 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
CSNK1E-208ENST00000431611 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
CSNK1E-208ENST00000431611 SYNJ2O15056 1496 aa27.16■■□□□ 1.94
CSNK1E-208ENST00000431611 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
CSNK1E-208ENST00000431611 SYNJ1O43426 1573 aa27.14■■□□□ 1.94
CSNK1E-208ENST00000431611 CLASP1Q7Z460 1538 aa27.14■■□□□ 1.94
CSNK1E-208ENST00000431611 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
CSNK1E-208ENST00000431611 TRHP20396 242 aaPredicted RBP27.07■■□□□ 1.92
CSNK1E-208ENST00000431611 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
CSNK1E-208ENST00000431611 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
CSNK1E-208ENST00000431611 ABCA5Q8WWZ7 1642 aa27.04■■□□□ 1.92
CSNK1E-208ENST00000431611 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
CSNK1E-208ENST00000431611 BIVM-ERCC5R4GMW8 1640 aa26.91■■□□□ 1.9
CSNK1E-208ENST00000431611 GRIN2AQ12879 1464 aa26.89■■□□□ 1.9
CSNK1E-208ENST00000431611 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
CSNK1E-208ENST00000431611 FHAD1B1AJZ9 1412 aa26.83■■□□□ 1.89
CSNK1E-208ENST00000431611 NUP160Q12769 1436 aa26.81■■□□□ 1.88
CSNK1E-208ENST00000431611 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
CSNK1E-208ENST00000431611 CEP170Q5SW79 1584 aa26.76■■□□□ 1.87
CSNK1E-208ENST00000431611 ERCC6L2Q5T890 1561 aa26.72■■□□□ 1.87
CSNK1E-208ENST00000431611 SHROOM2Q13796 1616 aa26.63■■□□□ 1.85
CSNK1E-208ENST00000431611 JPH4Q96JJ6 628 aa26.59■■□□□ 1.85
CSNK1E-208ENST00000431611 PRG4Q92954 1404 aaPredicted RBP26.57■■□□□ 1.84
CSNK1E-208ENST00000431611 KIF27Q86VH2 1401 aa26.48■■□□□ 1.83
CSNK1E-208ENST00000431611 IGF1RP08069 1367 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms