RNA–Protein interactions for RNA: ENST00000372826.6

PABPC1L-208, Transcript of poly(A) binding protein cytoplasmic 1 like, humanhuman

TSL 5

Gene PABPC1L, Length 854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1L-208ENST00000372826 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
PABPC1L-208ENST00000372826 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
PABPC1L-208ENST00000372826 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
PABPC1L-208ENST00000372826 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
PABPC1L-208ENST00000372826 ABCC9O60706 1549 aa21.41■■□□□ 1.02
PABPC1L-208ENST00000372826 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
PABPC1L-208ENST00000372826 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
PABPC1L-208ENST00000372826 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
PABPC1L-208ENST00000372826 MYO15BQ96JP2 1530 aa20.44■□□□□ 0.86
PABPC1L-208ENST00000372826 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
PABPC1L-208ENST00000372826 NACADO15069 1562 aa20.41■□□□□ 0.86
PABPC1L-208ENST00000372826 DCAF8L2P0C7V8 631 aa20.38■□□□□ 0.85
PABPC1L-208ENST00000372826 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
PABPC1L-208ENST00000372826 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.781e-7■■□□□ 11.7
PABPC1L-208ENST00000372826 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
PABPC1L-208ENST00000372826 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
PABPC1L-208ENST00000372826 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
PABPC1L-208ENST00000372826 SHROOM4Q9ULL8 1493 aa19.68■□□□□ 0.74
PABPC1L-208ENST00000372826 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
PABPC1L-208ENST00000372826 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
PABPC1L-208ENST00000372826 CC2D2AQ9P2K1 1620 aa19.31■□□□□ 0.68
PABPC1L-208ENST00000372826 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
PABPC1L-208ENST00000372826 BAZ1AQ9NRL2 1556 aaPredicted RBP19.13■□□□□ 0.65
PABPC1L-208ENST00000372826 SMARCA4P51532 1647 aa19.09■□□□□ 0.65
PABPC1L-208ENST00000372826 DNAJC5Q9H3Z4 198 aa19.05■□□□□ 0.64
PABPC1L-208ENST00000372826 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
PABPC1L-208ENST00000372826 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
PABPC1L-208ENST00000372826 RSF1Q96T23 1441 aaPredicted RBP18.96■□□□□ 0.63
PABPC1L-208ENST00000372826 PEG3Q9GZU2 1588 aa18.93■□□□□ 0.62
PABPC1L-208ENST00000372826 SMARCA2P51531 1590 aa18.89■□□□□ 0.62
PABPC1L-208ENST00000372826 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
PABPC1L-208ENST00000372826 WIZO95785 1651 aa18.84■□□□□ 0.61
PABPC1L-208ENST00000372826 NCAPD3P42695 1498 aa18.83■□□□□ 0.6
PABPC1L-208ENST00000372826 HMGXB3Q12766 1538 aa18.79■□□□□ 0.6
PABPC1L-208ENST00000372826 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
PABPC1L-208ENST00000372826 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
PABPC1L-208ENST00000372826 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
PABPC1L-208ENST00000372826 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
PABPC1L-208ENST00000372826 CUX2O14529 1486 aa18.64■□□□□ 0.57
PABPC1L-208ENST00000372826 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
PABPC1L-208ENST00000372826 CCDC88BA6NC98 1476 aa18.45■□□□□ 0.54
PABPC1L-208ENST00000372826 KCNA4P22459 653 aa18.43■□□□□ 0.54
PABPC1L-208ENST00000372826 ADRA2BP18089 450 aa18.36■□□□□ 0.53
PABPC1L-208ENST00000372826 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
PABPC1L-208ENST00000372826 NESP48681 1621 aa18.28■□□□□ 0.52
PABPC1L-208ENST00000372826 CFTRP13569 1480 aa18.27■□□□□ 0.52
PABPC1L-208ENST00000372826 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
PABPC1L-208ENST00000372826 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
PABPC1L-208ENST00000372826 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
PABPC1L-208ENST00000372826 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
PABPC1L-208ENST00000372826 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
PABPC1L-208ENST00000372826 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
PABPC1L-208ENST00000372826 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
PABPC1L-208ENST00000372826 CEP164Q9UPV0 1460 aa18.02■□□□□ 0.48
PABPC1L-208ENST00000372826 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
PABPC1L-208ENST00000372826 MRC2Q9UBG0 1479 aa17.94■□□□□ 0.46
PABPC1L-208ENST00000372826 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
PABPC1L-208ENST00000372826 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
PABPC1L-208ENST00000372826 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
PABPC1L-208ENST00000372826 WDR62O43379 1518 aa17.88■□□□□ 0.45
PABPC1L-208ENST00000372826 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
PABPC1L-208ENST00000372826 DNMBPQ6XZF7 1577 aa17.86■□□□□ 0.45
PABPC1L-208ENST00000372826 CUX1P39880 1505 aa17.85■□□□□ 0.45
PABPC1L-208ENST00000372826 TOPBP1Q92547 1522 aa17.83■□□□□ 0.45
PABPC1L-208ENST00000372826 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
PABPC1L-208ENST00000372826 SYNJ1O43426 1573 aa17.81■□□□□ 0.44
PABPC1L-208ENST00000372826 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
PABPC1L-208ENST00000372826 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
PABPC1L-208ENST00000372826 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
PABPC1L-208ENST00000372826 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
PABPC1L-208ENST00000372826 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
PABPC1L-208ENST00000372826 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
PABPC1L-208ENST00000372826 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
PABPC1L-208ENST00000372826 SOGA1O94964 1423 aa17.62■□□□□ 0.41
PABPC1L-208ENST00000372826 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
PABPC1L-208ENST00000372826 ABCA10Q8WWZ4 1543 aa17.58■□□□□ 0.41
PABPC1L-208ENST00000372826 WDR97A6NE52 1622 aa17.58■□□□□ 0.4
PABPC1L-208ENST00000372826 FOXD1Q16676 465 aa17.57■□□□□ 0.4
PABPC1L-208ENST00000372826 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.39
PABPC1L-208ENST00000372826 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
PABPC1L-208ENST00000372826 EIF4G3O43432 1585 aaKnown RBP17.48■□□□□ 0.39
PABPC1L-208ENST00000372826 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
PABPC1L-208ENST00000372826 KIF27Q86VH2 1401 aa17.46■□□□□ 0.39
PABPC1L-208ENST00000372826 RIMBP3CA6NJZ7 1639 aa17.45■□□□□ 0.38
PABPC1L-208ENST00000372826 RIMBP3BA6NNM3 1639 aa17.45■□□□□ 0.38
PABPC1L-208ENST00000372826 RIMBP3Q9UFD9 1639 aa17.45■□□□□ 0.38
PABPC1L-208ENST00000372826 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.386e-6■■■■□ 25.1
PABPC1L-208ENST00000372826 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
PABPC1L-208ENST00000372826 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
PABPC1L-208ENST00000372826 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
PABPC1L-208ENST00000372826 EEA1Q15075 1411 aa17.39■□□□□ 0.38
PABPC1L-208ENST00000372826 GRIN2BQ13224 1484 aa17.39■□□□□ 0.37
PABPC1L-208ENST00000372826 CYB5RLQ6IPT4 315 aa17.39■□□□□ 0.37
PABPC1L-208ENST00000372826 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
PABPC1L-208ENST00000372826 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
PABPC1L-208ENST00000372826 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
PABPC1L-208ENST00000372826 IGF1RP08069 1367 aa17.33■□□□□ 0.36
PABPC1L-208ENST00000372826 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
PABPC1L-208ENST00000372826 MAGI1Q96QZ7 1491 aaPredicted RBP17.32■□□□□ 0.36
PABPC1L-208ENST00000372826 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms