RNA–Protein interactions for RNA: ENST00000585614.1

GPATCH8-202, Transcript of G-patch domain containing 8, humanhuman

TSL 3

Gene GPATCH8, Length 686 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-202ENST00000585614 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
GPATCH8-202ENST00000585614 CCDC180Q9P1Z9 1646 aa19.97■□□□□ 0.79
GPATCH8-202ENST00000585614 ABCC9O60706 1549 aa18.96■□□□□ 0.63
GPATCH8-202ENST00000585614 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
GPATCH8-202ENST00000585614 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
GPATCH8-202ENST00000585614 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
GPATCH8-202ENST00000585614 NACADO15069 1562 aa18.64■□□□□ 0.58
GPATCH8-202ENST00000585614 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
GPATCH8-202ENST00000585614 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
GPATCH8-202ENST00000585614 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
GPATCH8-202ENST00000585614 UNC13AQ9UPW8 1703 aa18.11■□□□□ 0.49
GPATCH8-202ENST00000585614 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
GPATCH8-202ENST00000585614 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
GPATCH8-202ENST00000585614 PABPN1Q86U42 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
GPATCH8-202ENST00000585614 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.39
GPATCH8-202ENST00000585614 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
GPATCH8-202ENST00000585614 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
GPATCH8-202ENST00000585614 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
GPATCH8-202ENST00000585614 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
GPATCH8-202ENST00000585614 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
GPATCH8-202ENST00000585614 PEG3Q9GZU2 1588 aa17.33■□□□□ 0.37
GPATCH8-202ENST00000585614 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
GPATCH8-202ENST00000585614 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
GPATCH8-202ENST00000585614 WIZO95785 1651 aa17.23■□□□□ 0.35
GPATCH8-202ENST00000585614 CC2D2AQ9P2K1 1620 aa17.23■□□□□ 0.35
GPATCH8-202ENST00000585614 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
GPATCH8-202ENST00000585614 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
GPATCH8-202ENST00000585614 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
GPATCH8-202ENST00000585614 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
GPATCH8-202ENST00000585614 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
GPATCH8-202ENST00000585614 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
GPATCH8-202ENST00000585614 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
GPATCH8-202ENST00000585614 CFTRP13569 1480 aa16.69■□□□□ 0.26
GPATCH8-202ENST00000585614 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
GPATCH8-202ENST00000585614 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
GPATCH8-202ENST00000585614 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
GPATCH8-202ENST00000585614 NESP48681 1621 aa16.55■□□□□ 0.24
GPATCH8-202ENST00000585614 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
GPATCH8-202ENST00000585614 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
GPATCH8-202ENST00000585614 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
GPATCH8-202ENST00000585614 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
GPATCH8-202ENST00000585614 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
GPATCH8-202ENST00000585614 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
GPATCH8-202ENST00000585614 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
GPATCH8-202ENST00000585614 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
GPATCH8-202ENST00000585614 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
GPATCH8-202ENST00000585614 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
GPATCH8-202ENST00000585614 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
GPATCH8-202ENST00000585614 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
GPATCH8-202ENST00000585614 CUX1P39880 1505 aa16.31■□□□□ 0.2
GPATCH8-202ENST00000585614 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
GPATCH8-202ENST00000585614 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
GPATCH8-202ENST00000585614 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
GPATCH8-202ENST00000585614 TOPBP1Q92547 1522 aa16.27■□□□□ 0.2
GPATCH8-202ENST00000585614 WDR62O43379 1518 aa16.26■□□□□ 0.19
GPATCH8-202ENST00000585614 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
GPATCH8-202ENST00000585614 FGD5Q6ZNL6 1462 aa16.17■□□□□ 0.18
GPATCH8-202ENST00000585614 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
GPATCH8-202ENST00000585614 CUX2O14529 1486 aa16.09■□□□□ 0.17
GPATCH8-202ENST00000585614 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
GPATCH8-202ENST00000585614 WDR97A6NE52 1622 aa16.08■□□□□ 0.17
GPATCH8-202ENST00000585614 TARBP1Q13395 1621 aaKnown RBP16.08■□□□□ 0.17
GPATCH8-202ENST00000585614 SOGA1O94964 1423 aa16.08■□□□□ 0.16
GPATCH8-202ENST00000585614 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
GPATCH8-202ENST00000585614 RAD54L2Q9Y4B4 1467 aa16.04■□□□□ 0.16
GPATCH8-202ENST00000585614 EEA1Q15075 1411 aa16.04■□□□□ 0.16
GPATCH8-202ENST00000585614 KIF27Q86VH2 1401 aa16.01■□□□□ 0.15
GPATCH8-202ENST00000585614 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
GPATCH8-202ENST00000585614 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
GPATCH8-202ENST00000585614 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
GPATCH8-202ENST00000585614 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
GPATCH8-202ENST00000585614 EIF4G3O43432 1585 aaKnown RBP15.91■□□□□ 0.14
GPATCH8-202ENST00000585614 ZNF608Q9ULD9 1512 aaPredicted RBP15.9■□□□□ 0.14
GPATCH8-202ENST00000585614 TDRD9Q8NDG6 1382 aaKnown RBP15.89■□□□□ 0.13
GPATCH8-202ENST00000585614 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
GPATCH8-202ENST00000585614 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.13
GPATCH8-202ENST00000585614 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
GPATCH8-202ENST00000585614 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
GPATCH8-202ENST00000585614 IGF1RP08069 1367 aa15.87■□□□□ 0.13
GPATCH8-202ENST00000585614 CUL7Q14999 1698 aa15.86■□□□□ 0.13
GPATCH8-202ENST00000585614 KIF21BO75037 1637 aa15.83■□□□□ 0.13
GPATCH8-202ENST00000585614 PRXQ9BXM0 1461 aa15.83■□□□□ 0.12
GPATCH8-202ENST00000585614 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
GPATCH8-202ENST00000585614 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
GPATCH8-202ENST00000585614 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
GPATCH8-202ENST00000585614 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.12
GPATCH8-202ENST00000585614 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.11
GPATCH8-202ENST00000585614 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
GPATCH8-202ENST00000585614 RAPGEF2Q9Y4G8 1499 aa15.76■□□□□ 0.11
GPATCH8-202ENST00000585614 GOLGA3Q08378 1498 aa15.75■□□□□ 0.11
GPATCH8-202ENST00000585614 SYNJ2O15056 1496 aa15.71■□□□□ 0.11
GPATCH8-202ENST00000585614 GRIN2AQ12879 1464 aa15.66■□□□□ 0.1
GPATCH8-202ENST00000585614 TNIKQ9UKE5 1360 aa15.63■□□□□ 0.09
GPATCH8-202ENST00000585614 CTTNBP2Q8WZ74 1663 aa15.61■□□□□ 0.09
GPATCH8-202ENST00000585614 CHD1O14646 1710 aa15.61■□□□□ 0.09
GPATCH8-202ENST00000585614 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
GPATCH8-202ENST00000585614 CHMP7Q8WUX9 453 aaPredicted RBP15.61■□□□□ 0.09
GPATCH8-202ENST00000585614 NUP160Q12769 1436 aa15.6■□□□□ 0.09
GPATCH8-202ENST00000585614 UBTFP17480 764 aaKnown RBP15.58■□□□□ 0.08
GPATCH8-202ENST00000585614 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms