RNA–Protein interactions for RNA: ENST00000641107.1

HNRNPR-213, Transcript of heterogeneous nuclear ribonucleoprotein R, humanhuman

Gene HNRNPR, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPR-213ENST00000641107 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
HNRNPR-213ENST00000641107 CCDC180Q9P1Z9 1646 aa30.61■■■□□ 2.49
HNRNPR-213ENST00000641107 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
HNRNPR-213ENST00000641107 ABCC9O60706 1549 aa29.13■■■□□ 2.25
HNRNPR-213ENST00000641107 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
HNRNPR-213ENST00000641107 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
HNRNPR-213ENST00000641107 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
HNRNPR-213ENST00000641107 NACADO15069 1562 aa28.58■■■□□ 2.17
HNRNPR-213ENST00000641107 RB1CC1Q8TDY2 1594 aa28.38■■■□□ 2.13
HNRNPR-213ENST00000641107 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
HNRNPR-213ENST00000641107 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
HNRNPR-213ENST00000641107 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
HNRNPR-213ENST00000641107 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
HNRNPR-213ENST00000641107 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
HNRNPR-213ENST00000641107 CECR2Q9BXF3 1484 aa27.17■■□□□ 1.94
HNRNPR-213ENST00000641107 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
HNRNPR-213ENST00000641107 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
HNRNPR-213ENST00000641107 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.91
HNRNPR-213ENST00000641107 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
HNRNPR-213ENST00000641107 SMARCA4P51532 1647 aa26.9■■□□□ 1.9
HNRNPR-213ENST00000641107 WIZO95785 1651 aa26.74■■□□□ 1.87
HNRNPR-213ENST00000641107 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
HNRNPR-213ENST00000641107 PEG3Q9GZU2 1588 aa26.61■■□□□ 1.85
HNRNPR-213ENST00000641107 ATAD2BQ9ULI0 1458 aa26.55■■□□□ 1.84
HNRNPR-213ENST00000641107 SMARCA2P51531 1590 aa26.53■■□□□ 1.84
HNRNPR-213ENST00000641107 TOP2AP11388 1531 aaKnown RBP26.47■■□□□ 1.83
HNRNPR-213ENST00000641107 NCAPD3P42695 1498 aa26.39■■□□□ 1.82
HNRNPR-213ENST00000641107 CC2D2AQ9P2K1 1620 aa26.37■■□□□ 1.81
HNRNPR-213ENST00000641107 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
HNRNPR-213ENST00000641107 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
HNRNPR-213ENST00000641107 CCDC88BA6NC98 1476 aa26.22■■□□□ 1.79
HNRNPR-213ENST00000641107 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
HNRNPR-213ENST00000641107 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
HNRNPR-213ENST00000641107 CFTRP13569 1480 aa25.71■■□□□ 1.71
HNRNPR-213ENST00000641107 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
HNRNPR-213ENST00000641107 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
HNRNPR-213ENST00000641107 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
HNRNPR-213ENST00000641107 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
HNRNPR-213ENST00000641107 LAMC3Q9Y6N6 1575 aa25.51■■□□□ 1.67
HNRNPR-213ENST00000641107 NESP48681 1621 aa25.48■■□□□ 1.67
HNRNPR-213ENST00000641107 WRNQ14191 1432 aaPredicted RBP eCLIP25.43■■□□□ 1.669e-6■■■■■ 50.1
HNRNPR-213ENST00000641107 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
HNRNPR-213ENST00000641107 PDS5BQ9NTI5 1447 aa25.33■■□□□ 1.65
HNRNPR-213ENST00000641107 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
HNRNPR-213ENST00000641107 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
HNRNPR-213ENST00000641107 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
HNRNPR-213ENST00000641107 CUX1P39880 1505 aa25.24■■□□□ 1.63
HNRNPR-213ENST00000641107 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
HNRNPR-213ENST00000641107 KIF21AQ7Z4S6 1674 aa25.19■■□□□ 1.62
HNRNPR-213ENST00000641107 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
HNRNPR-213ENST00000641107 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
HNRNPR-213ENST00000641107 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
HNRNPR-213ENST00000641107 FAM9AQ8IZU1 332 aaPredicted RBP25.04■■□□□ 1.6
HNRNPR-213ENST00000641107 SOGA1O94964 1423 aa25.03■■□□□ 1.6
HNRNPR-213ENST00000641107 ERCC6Q03468 1493 aa25■■□□□ 1.59
HNRNPR-213ENST00000641107 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
HNRNPR-213ENST00000641107 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
HNRNPR-213ENST00000641107 EEA1Q15075 1411 aa24.96■■□□□ 1.59
HNRNPR-213ENST00000641107 RUSC2Q8N2Y8 1516 aa24.95■■□□□ 1.58
HNRNPR-213ENST00000641107 POLA1P09884 1462 aaPredicted RBP24.91■■□□□ 1.58
HNRNPR-213ENST00000641107 CSRNP3Q8WYN3 585 aa24.89■■□□□ 1.58
HNRNPR-213ENST00000641107 LOC105371045A0A1W2PR82 267 aa24.87■■□□□ 1.57
HNRNPR-213ENST00000641107 WDR62O43379 1518 aa24.86■■□□□ 1.57
HNRNPR-213ENST00000641107 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
HNRNPR-213ENST00000641107 KIF27Q86VH2 1401 aa24.83■■□□□ 1.57
HNRNPR-213ENST00000641107 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
HNRNPR-213ENST00000641107 CUX2O14529 1486 aa24.8■■□□□ 1.56
HNRNPR-213ENST00000641107 ABCA10Q8WWZ4 1543 aa24.8■■□□□ 1.56
HNRNPR-213ENST00000641107 TARBP1Q13395 1621 aaKnown RBP24.72■■□□□ 1.55
HNRNPR-213ENST00000641107 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
HNRNPR-213ENST00000641107 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
HNRNPR-213ENST00000641107 IGF1RP08069 1367 aa24.66■■□□□ 1.54
HNRNPR-213ENST00000641107 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
HNRNPR-213ENST00000641107 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
HNRNPR-213ENST00000641107 KIF21BO75037 1637 aa24.62■■□□□ 1.53
HNRNPR-213ENST00000641107 PRXQ9BXM0 1461 aa24.59■■□□□ 1.53
HNRNPR-213ENST00000641107 ABCA5Q8WWZ7 1642 aa24.59■■□□□ 1.53
HNRNPR-213ENST00000641107 GOLGA3Q08378 1498 aa24.58■■□□□ 1.52
HNRNPR-213ENST00000641107 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.52
HNRNPR-213ENST00000641107 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
HNRNPR-213ENST00000641107 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.51
HNRNPR-213ENST00000641107 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
HNRNPR-213ENST00000641107 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
HNRNPR-213ENST00000641107 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
HNRNPR-213ENST00000641107 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
HNRNPR-213ENST00000641107 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
HNRNPR-213ENST00000641107 CUL7Q14999 1698 aa24.45■■□□□ 1.5
HNRNPR-213ENST00000641107 PBRM1Q86U86 1689 aa24.44■■□□□ 1.5
HNRNPR-213ENST00000641107 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
HNRNPR-213ENST00000641107 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
HNRNPR-213ENST00000641107 FHAD1B1AJZ9 1412 aa24.33■■□□□ 1.49
HNRNPR-213ENST00000641107 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
HNRNPR-213ENST00000641107 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
HNRNPR-213ENST00000641107 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
HNRNPR-213ENST00000641107 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
HNRNPR-213ENST00000641107 CLIP1P30622 1438 aa24.18■■□□□ 1.46
HNRNPR-213ENST00000641107 SYNJ2O15056 1496 aa24.15■■□□□ 1.46
HNRNPR-213ENST00000641107 CTTNBP2Q8WZ74 1663 aa24.15■■□□□ 1.46
HNRNPR-213ENST00000641107 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
HNRNPR-213ENST00000641107 RANGAP1P46060 587 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms