RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 AEBP2Q6ZN18 517 aaPredicted RBP15.52■□□□□ 0.08
RPRD1A-210ENST00000591994 CHIC1Q5VXU3 224 aa14.94□□□□□ -0.02
RPRD1A-210ENST00000591994 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
RPRD1A-210ENST00000591994 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
RPRD1A-210ENST00000591994 FOXD1Q16676 465 aa12.36□□□□□ -0.43
RPRD1A-210ENST00000591994 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.48
RPRD1A-210ENST00000591994 MSH5O43196 834 aa11.68□□□□□ -0.54
RPRD1A-210ENST00000591994 PIAS4Q8N2W9 510 aaPredicted RBP11.59□□□□□ -0.55
RPRD1A-210ENST00000591994 PPP6R1Q9UPN7 881 aa11.55□□□□□ -0.56
RPRD1A-210ENST00000591994 ADRA2BP18089 450 aa11.55□□□□□ -0.56
RPRD1A-210ENST00000591994 POTEDQ86YR6 584 aa11.12□□□□□ -0.63
RPRD1A-210ENST00000591994 SCAF1Q9H7N4 1312 aaKnown RBP10.78□□□□□ -0.68
RPRD1A-210ENST00000591994 DMRT2Q9Y5R5 561 aa10.61□□□□□ -0.71
RPRD1A-210ENST00000591994 MAPK8IP2Q13387 824 aaPredicted RBP10.55□□□□□ -0.72
RPRD1A-210ENST00000591994 PPP4R3CPQ6ZMV5 832 aa10.5□□□□□ -0.73
RPRD1A-210ENST00000591994 CNKSR2Q8WXI2 1034 aa10.34□□□□□ -0.75
RPRD1A-210ENST00000591994 HOXD11P31277 338 aaPredicted RBP10.26□□□□□ -0.77
RPRD1A-210ENST00000591994 NCBP3Q53F19 620 aaKnown RBP10.24□□□□□ -0.77
RPRD1A-210ENST00000591994 RNF216Q9NWF9 866 aaPredicted RBP10.23□□□□□ -0.77
RPRD1A-210ENST00000591994 DCAF8L1A6NGE4 600 aa10.1□□□□□ -0.79
RPRD1A-210ENST00000591994 DNAJC5BQ9UF47 199 aa10.02□□□□□ -0.81
RPRD1A-210ENST00000591994 NPM3O75607 178 aaKnown RBP9.94□□□□□ -0.82
RPRD1A-210ENST00000591994 CACNB1Q02641 598 aaPredicted RBP9.9□□□□□ -0.83
RPRD1A-210ENST00000591994 RNF39Q9H2S5 420 aa9.9□□□□□ -0.83
RPRD1A-210ENST00000591994 C1QBPQ07021 282 aaKnown RBP9.82□□□□□ -0.84
RPRD1A-210ENST00000591994 KCNA4P22459 653 aa9.78□□□□□ -0.84
RPRD1A-210ENST00000591994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.77□□□□□ -0.85
RPRD1A-210ENST00000591994 U3KPZ7 1027 aaPredicted RBP9.51□□□□□ -0.89
RPRD1A-210ENST00000591994 APLP2Q06481 763 aa9.49□□□□□ -0.89
RPRD1A-210ENST00000591994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.44□□□□□ -0.9
RPRD1A-210ENST00000591994 SLC4A2P04920 1241 aa9.44□□□□□ -0.9
RPRD1A-210ENST00000591994 HNRNPUL2Q1KMD3 747 aaKnown RBP9.44□□□□□ -0.9
RPRD1A-210ENST00000591994 SAMD1Q6SPF0 538 aaPredicted RBP9.36□□□□□ -0.91
RPRD1A-210ENST00000591994 CAPN15O75808 1086 aa9.35□□□□□ -0.91
RPRD1A-210ENST00000591994 SLC4A1APQ9BWU0 796 aaKnown RBP9.33□□□□□ -0.92
RPRD1A-210ENST00000591994 SPINK5Q9NQ38 1064 aaPredicted RBP9.3□□□□□ -0.92
RPRD1A-210ENST00000591994 ZNF219Q9P2Y4 722 aaPredicted RBP9.29□□□□□ -0.92
RPRD1A-210ENST00000591994 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
RPRD1A-210ENST00000591994 DSG3P32926 999 aa9.27□□□□□ -0.93
RPRD1A-210ENST00000591994 FOXD4L1Q9NU39 408 aa9.21□□□□□ -0.94
RPRD1A-210ENST00000591994 TRHP20396 242 aaPredicted RBP9.2□□□□□ -0.94
RPRD1A-210ENST00000591994 ABCB7O75027 752 aa9.08□□□□□ -0.96
RPRD1A-210ENST00000591994 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
RPRD1A-210ENST00000591994 POLA2Q14181 598 aa8.98□□□□□ -0.97
RPRD1A-210ENST00000591994 RBM42Q9BTD8 480 aaKnown RBP8.97□□□□□ -0.97
RPRD1A-210ENST00000591994 ZBTB12Q9Y330 459 aaPredicted RBP8.97□□□□□ -0.97
RPRD1A-210ENST00000591994 ZBTB22O15209 634 aa8.94□□□□□ -0.98
RPRD1A-210ENST00000591994 ATF5Q9Y2D1 282 aaPredicted RBP8.9□□□□□ -0.99
RPRD1A-210ENST00000591994 POTEHQ6S545 545 aa8.75□□□□□ -1.01
RPRD1A-210ENST00000591994 AKT1S1Q96B36 256 aa8.75□□□□□ -1.01
RPRD1A-210ENST00000591994 FBLN2P98095 1184 aa8.74□□□□□ -1.01
RPRD1A-210ENST00000591994 CSRNP3Q8WYN3 585 aa8.66□□□□□ -1.02
RPRD1A-210ENST00000591994 OSCARQ8IYS5 282 aa8.65□□□□□ -1.02
RPRD1A-210ENST00000591994 SPDYE2BA6NHP3 402 aa8.63□□□□□ -1.03
RPRD1A-210ENST00000591994 SPDYE6P0CI01 402 aa8.63□□□□□ -1.03
RPRD1A-210ENST00000591994 SPDYE2Q495Y8 402 aa8.63□□□□□ -1.03
RPRD1A-210ENST00000591994 CHRDL2Q6WN34 429 aa8.63□□□□□ -1.03
RPRD1A-210ENST00000591994 REM2Q8IYK8 340 aaPredicted RBP8.6□□□□□ -1.03
RPRD1A-210ENST00000591994 EHMT2Q96KQ7 1210 aa8.55□□□□□ -1.04
RPRD1A-210ENST00000591994 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
RPRD1A-210ENST00000591994 ZNF692Q9BU19 519 aaPredicted RBP8.49□□□□□ -1.05
RPRD1A-210ENST00000591994 SSUH2Q9Y2M2 353 aa8.48□□□□□ -1.05
RPRD1A-210ENST00000591994 PITPNM1O00562 1244 aa8.47□□□□□ -1.05
RPRD1A-210ENST00000591994 SPDYE1Q8NFV5 336 aaPredicted RBP8.46□□□□□ -1.05
RPRD1A-210ENST00000591994 FXR2P51116 673 aaKnown RBP eCLIP8.43□□□□□ -1.06
RPRD1A-210ENST00000591994 PIP4P2Q8N4L2 257 aa8.43□□□□□ -1.06
RPRD1A-210ENST00000591994 CLEC11AQ9Y240 323 aa8.35□□□□□ -1.07
RPRD1A-210ENST00000591994 PABPN1Q86U42 306 aaKnown RBP eCLIP8.34□□□□□ -1.07
RPRD1A-210ENST00000591994 PRR29P0C7W0 189 aa8.28□□□□□ -1.08
RPRD1A-210ENST00000591994 PRKAR2AP13861 404 aaKnown RBP8.27□□□□□ -1.09
RPRD1A-210ENST00000591994 STAG3Q9UJ98 1225 aa8.27□□□□□ -1.09
RPRD1A-210ENST00000591994 SP7Q8TDD2 431 aaPredicted RBP8.27□□□□□ -1.09
RPRD1A-210ENST00000591994 HAX1O00165 279 aa8.26□□□□□ -1.09
RPRD1A-210ENST00000591994 SPDYE4A6NLX3 237 aa8.24□□□□□ -1.09
RPRD1A-210ENST00000591994 C19orf67A6NJJ6 358 aa8.17□□□□□ -1.1
RPRD1A-210ENST00000591994 CHADLQ6NUI6 762 aa8.12□□□□□ -1.11
RPRD1A-210ENST00000591994 FARP1Q9Y4F1 1045 aaPredicted RBP8.11□□□□□ -1.11
RPRD1A-210ENST00000591994 CLCN6P51797 869 aa8.1□□□□□ -1.11
RPRD1A-210ENST00000591994 PROM2Q8N271 834 aa8.08□□□□□ -1.12
RPRD1A-210ENST00000591994 EVX2Q03828 476 aa8.06□□□□□ -1.12
RPRD1A-210ENST00000591994 CREBZFQ9NS37 354 aa8.06□□□□□ -1.12
RPRD1A-210ENST00000591994 NPM1P06748 294 aaKnown RBP eCLIP8.03□□□□□ -1.12
RPRD1A-210ENST00000591994 CD44P16070 742 aaKnown RBP8.03□□□□□ -1.12
RPRD1A-210ENST00000591994 GABBR2O75899 941 aa7.99□□□□□ -1.13
RPRD1A-210ENST00000591994 PAK3O75914 559 aaPredicted RBP7.98□□□□□ -1.13
RPRD1A-210ENST00000591994 PLEKHG5O94827 1062 aa7.96□□□□□ -1.13
RPRD1A-210ENST00000591994 ZNF579Q8NAF0 562 aaKnown RBP7.95□□□□□ -1.14
RPRD1A-210ENST00000591994 ZRANB1Q9UGI0 708 aa7.93□□□□□ -1.14
RPRD1A-210ENST00000591994 MNX1P50219 401 aaPredicted RBP7.9□□□□□ -1.14
RPRD1A-210ENST00000591994 FKBP8Q14318 412 aa7.87□□□□□ -1.15
RPRD1A-210ENST00000591994 ZBTB47Q9UFB7 747 aaPredicted RBP7.87□□□□□ -1.15
RPRD1A-210ENST00000591994 MIER1Q8N108 512 aa7.86□□□□□ -1.15
RPRD1A-210ENST00000591994 DCBLD2Q96PD2 775 aa7.84□□□□□ -1.16
RPRD1A-210ENST00000591994 FBXO3Q9UK99 471 aa7.84□□□□□ -1.16
RPRD1A-210ENST00000591994 PLCD3Q8N3E9 789 aa7.81□□□□□ -1.16
RPRD1A-210ENST00000591994 PHF12Q96QT6 1004 aa7.77□□□□□ -1.17
RPRD1A-210ENST00000591994 POTEIP0CG38 1075 aa7.76□□□□□ -1.17
RPRD1A-210ENST00000591994 LHX8Q68G74 356 aa7.76□□□□□ -1.17
RPRD1A-210ENST00000591994 GALR2O43603 387 aaPredicted RBP7.74□□□□□ -1.17
RPRD1A-210ENST00000591994 TSPYL2Q9H2G4 693 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms