RNA–Protein interactions for RNA: ENST00000541377.5

CLASP1-215, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 7,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-215ENST00000541377 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
CLASP1-215ENST00000541377 FAM9AQ8IZU1 332 aaPredicted RBP14.74□□□□□ -0.05
CLASP1-215ENST00000541377 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
CLASP1-215ENST00000541377 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
CLASP1-215ENST00000541377 APLP2Q06481 763 aa14.37□□□□□ -0.11
CLASP1-215ENST00000541377 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
CLASP1-215ENST00000541377 ATP1B4Q9UN42 357 aaPredicted RBP14.04□□□□□ -0.16
CLASP1-215ENST00000541377 MYT1LQ9UL68 1186 aa13.93□□□□□ -0.18
CLASP1-215ENST00000541377 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
CLASP1-215ENST00000541377 RANGAP1P46060 587 aaPredicted RBP13.89□□□□□ -0.19
CLASP1-215ENST00000541377 SHROOM4Q9ULL8 1493 aa13.89□□□□□ -0.19
CLASP1-215ENST00000541377 CCER1Q8TC90 406 aaPredicted RBP13.86□□□□□ -0.19
CLASP1-215ENST00000541377 TTBK1Q5TCY1 1321 aaPredicted RBP13.86□□□□□ -0.19
CLASP1-215ENST00000541377 CHIC1Q5VXU3 224 aa13.71□□□□□ -0.22
CLASP1-215ENST00000541377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
CLASP1-215ENST00000541377 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
CLASP1-215ENST00000541377 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
CLASP1-215ENST00000541377 DAXXQ9UER7 740 aaPredicted RBP13.48□□□□□ -0.25
CLASP1-215ENST00000541377 NEFLP07196 543 aa13.48□□□□□ -0.25
CLASP1-215ENST00000541377 PCGF6Q9BYE7 350 aa13.47□□□□□ -0.25
CLASP1-215ENST00000541377 NISCHQ9Y2I1 1504 aa13.43□□□□□ -0.26
CLASP1-215ENST00000541377 POLR3GLQ9BT43 218 aa13.43□□□□□ -0.26
CLASP1-215ENST00000541377 UBTFP17480 764 aaKnown RBP13.42□□□□□ -0.26
CLASP1-215ENST00000541377 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
CLASP1-215ENST00000541377 MYT1Q01538 1121 aa13.27□□□□□ -0.29
CLASP1-215ENST00000541377 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
CLASP1-215ENST00000541377 CNGB1Q14028 1251 aaPredicted RBP13.22□□□□□ -0.29
CLASP1-215ENST00000541377 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
CLASP1-215ENST00000541377 BCANQ96GW7 911 aa13.18□□□□□ -0.3
CLASP1-215ENST00000541377 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
CLASP1-215ENST00000541377 ITGAEP38570 1179 aa13.11□□□□□ -0.31
CLASP1-215ENST00000541377 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
CLASP1-215ENST00000541377 ZBTB47Q9UFB7 747 aaPredicted RBP13.08□□□□□ -0.32
CLASP1-215ENST00000541377 ZNF316A6NFI3 1004 aaPredicted RBP13.04□□□□□ -0.32
CLASP1-215ENST00000541377 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.32
CLASP1-215ENST00000541377 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
CLASP1-215ENST00000541377 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
CLASP1-215ENST00000541377 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.34
CLASP1-215ENST00000541377 NEFMP07197 916 aa12.9□□□□□ -0.34
CLASP1-215ENST00000541377 FBLN2P98095 1184 aa12.89□□□□□ -0.35
CLASP1-215ENST00000541377 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
CLASP1-215ENST00000541377 A0A0G2JS52 829 aa12.81□□□□□ -0.36
CLASP1-215ENST00000541377 TRIM52Q96A61 297 aa12.77□□□□□ -0.36
CLASP1-215ENST00000541377 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
CLASP1-215ENST00000541377 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
CLASP1-215ENST00000541377 RTL5Q5HYW3 569 aaPredicted RBP12.75□□□□□ -0.37
CLASP1-215ENST00000541377 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
CLASP1-215ENST00000541377 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.37
CLASP1-215ENST00000541377 ZNF326Q5BKZ1 582 aaKnown RBP12.7□□□□□ -0.38
CLASP1-215ENST00000541377 CDK11BP21127 795 aaKnown RBP12.65□□□□□ -0.38
CLASP1-215ENST00000541377 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
CLASP1-215ENST00000541377 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
CLASP1-215ENST00000541377 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLASP1-215ENST00000541377 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
CLASP1-215ENST00000541377 HAP1P54257 671 aaPredicted RBP12.52□□□□□ -0.41
CLASP1-215ENST00000541377 NEUROD1Q13562 356 aa12.51□□□□□ -0.41
CLASP1-215ENST00000541377 PLEKHG5O94827 1062 aa12.5□□□□□ -0.41
CLASP1-215ENST00000541377 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
CLASP1-215ENST00000541377 HSP90AA1P07900 732 aaKnown RBP12.46□□□□□ -0.41
CLASP1-215ENST00000541377 ZBTB7CA1YPR0 619 aa12.45□□□□□ -0.42
CLASP1-215ENST00000541377 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
CLASP1-215ENST00000541377 ARID3CA6NKF2 412 aa12.45□□□□□ -0.42
CLASP1-215ENST00000541377 ZNF777Q9ULD5 760 aaPredicted RBP12.44□□□□□ -0.42
CLASP1-215ENST00000541377 NPHP1O15259 732 aa12.43□□□□□ -0.42
CLASP1-215ENST00000541377 ANP32BQ92688 251 aaKnown RBP12.42□□□□□ -0.42
CLASP1-215ENST00000541377 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLASP1-215ENST00000541377 ARXQ96QS3 562 aa12.39□□□□□ -0.43
CLASP1-215ENST00000541377 NCBP3Q53F19 620 aaKnown RBP12.38□□□□□ -0.43
CLASP1-215ENST00000541377 TRIM26Q12899 539 aaPredicted RBP12.36□□□□□ -0.43
CLASP1-215ENST00000541377 ANP32CO43423 234 aa12.34□□□□□ -0.43
CLASP1-215ENST00000541377 ARID4BQ4LE39 1312 aaPredicted RBP12.32□□□□□ -0.44
CLASP1-215ENST00000541377 UPF2Q9HAU5 1272 aaKnown RBP12.27□□□□□ -0.45
CLASP1-215ENST00000541377 SENP3Q9H4L4 574 aaPredicted RBP12.26□□□□□ -0.45
CLASP1-215ENST00000541377 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
CLASP1-215ENST00000541377 P3H3Q8IVL6 736 aa12.24□□□□□ -0.45
CLASP1-215ENST00000541377 ABCC9O60706 1549 aa12.23□□□□□ -0.45
CLASP1-215ENST00000541377 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
CLASP1-215ENST00000541377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.453e-7■■□□□ 12.9
CLASP1-215ENST00000541377 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
CLASP1-215ENST00000541377 LMOD2Q6P5Q4 547 aa12.17□□□□□ -0.46
CLASP1-215ENST00000541377 DIEXFQ68CQ4 756 aaKnown RBP12.16□□□□□ -0.46
CLASP1-215ENST00000541377 ANP32AP39687 249 aaKnown RBP12.16□□□□□ -0.46
CLASP1-215ENST00000541377 CLSTN1O94985 981 aa12.16□□□□□ -0.46
CLASP1-215ENST00000541377 KRI1Q8N9T8 703 aaKnown RBP12.14□□□□□ -0.47
CLASP1-215ENST00000541377 HRCP23327 699 aa12.13□□□□□ -0.47
CLASP1-215ENST00000541377 GOLGA2Q08379 1002 aa12.13□□□□□ -0.47
CLASP1-215ENST00000541377 ZRSR1Q15695 479 aaKnown RBP12.1□□□□□ -0.47
CLASP1-215ENST00000541377 PRM3Q9NNZ6 103 aa12.09□□□□□ -0.47
CLASP1-215ENST00000541377 LOC105371045A0A1W2PR82 267 aa12.08□□□□□ -0.48
CLASP1-215ENST00000541377 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
CLASP1-215ENST00000541377 WDR43Q15061 677 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLASP1-215ENST00000541377 SALL2Q9Y467 1007 aaPredicted RBP12.06□□□□□ -0.48
CLASP1-215ENST00000541377 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
CLASP1-215ENST00000541377 TAOK2Q9UL54 1235 aa12.05□□□□□ -0.48
CLASP1-215ENST00000541377 TMX4Q9H1E5 349 aaPredicted RBP12.05□□□□□ -0.48
CLASP1-215ENST00000541377 AEBP2Q6ZN18 517 aaPredicted RBP12.05□□□□□ -0.48
CLASP1-215ENST00000541377 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
CLASP1-215ENST00000541377 NCLP19338 710 aaKnown RBP12.01□□□□□ -0.49
CLASP1-215ENST00000541377 TSPY4P0CV99 314 aa11.99□□□□□ -0.49
CLASP1-215ENST00000541377 TSPY10P0CW01 314 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms