RNA–Protein interactions for RNA: ENST00000480007.1

CLASP1-212, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 4

Gene CLASP1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-212ENST00000480007 AEBP2Q6ZN18 517 aaPredicted RBP33.09■■■□□ 2.89
CLASP1-212ENST00000480007 CHIC1Q5VXU3 224 aa32.62■■■□□ 2.81
CLASP1-212ENST00000480007 PHF23Q9BUL5 403 aaPredicted RBP28.7■■■□□ 2.18
CLASP1-212ENST00000480007 SENP3Q9H4L4 574 aaPredicted RBP28.06■■■□□ 2.08
CLASP1-212ENST00000480007 PLPPR3Q6T4P5 718 aa26.62■■□□□ 1.85
CLASP1-212ENST00000480007 FOXD1Q16676 465 aa25.98■■□□□ 1.75
CLASP1-212ENST00000480007 PPP6R1Q9UPN7 881 aa25.21■■□□□ 1.63
CLASP1-212ENST00000480007 ADRA2BP18089 450 aa25.2■■□□□ 1.62
CLASP1-212ENST00000480007 PIAS4Q8N2W9 510 aaPredicted RBP24.58■■□□□ 1.53
CLASP1-212ENST00000480007 MSH5O43196 834 aa23.87■■□□□ 1.41
CLASP1-212ENST00000480007 PPP4R3CPQ6ZMV5 832 aa23.47■■□□□ 1.35
CLASP1-212ENST00000480007 KCNA4P22459 653 aa23.27■■□□□ 1.32
CLASP1-212ENST00000480007 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.28
CLASP1-212ENST00000480007 NCBP3Q53F19 620 aaKnown RBP22.95■■□□□ 1.26
CLASP1-212ENST00000480007 MAPK8IP2Q13387 824 aaPredicted RBP22.76■■□□□ 1.23
CLASP1-212ENST00000480007 CNKSR2Q8WXI2 1034 aa22.76■■□□□ 1.23
CLASP1-212ENST00000480007 NPM3O75607 178 aaKnown RBP22.62■■□□□ 1.21
CLASP1-212ENST00000480007 DMRT2Q9Y5R5 561 aa22.45■■□□□ 1.18
CLASP1-212ENST00000480007 RNF216Q9NWF9 866 aaPredicted RBP22.26■■□□□ 1.15
CLASP1-212ENST00000480007 SLC4A1APQ9BWU0 796 aaKnown RBP22.21■■□□□ 1.15
CLASP1-212ENST00000480007 HOXD11P31277 338 aaPredicted RBP22.1■■□□□ 1.13
CLASP1-212ENST00000480007 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
CLASP1-212ENST00000480007 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
CLASP1-212ENST00000480007 CSRNP3Q8WYN3 585 aa21.52■■□□□ 1.04
CLASP1-212ENST00000480007 ZBTB22O15209 634 aa21.42■■□□□ 1.02
CLASP1-212ENST00000480007 DCAF8L1A6NGE4 600 aa21.4■■□□□ 1.02
CLASP1-212ENST00000480007 FOXD4L1Q9NU39 408 aa21.35■■□□□ 1.01
CLASP1-212ENST00000480007 SLC4A2P04920 1241 aa21.28■■□□□ 1
CLASP1-212ENST00000480007 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
CLASP1-212ENST00000480007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.02■□□□□ 0.964e-7■■□□□ 12.9
CLASP1-212ENST00000480007 MYCNP04198 464 aaPredicted RBP20.91■□□□□ 0.94
CLASP1-212ENST00000480007 U3KPZ7 1027 aaPredicted RBP20.74■□□□□ 0.91
CLASP1-212ENST00000480007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
CLASP1-212ENST00000480007 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
CLASP1-212ENST00000480007 ATXN8OSP0DMR3 200 aa20.58■□□□□ 0.89
CLASP1-212ENST00000480007 SAMD1Q6SPF0 538 aaPredicted RBP20.53■□□□□ 0.88
CLASP1-212ENST00000480007 RNF39Q9H2S5 420 aa20.48■□□□□ 0.87
CLASP1-212ENST00000480007 APLP2Q06481 763 aa20.31■□□□□ 0.84
CLASP1-212ENST00000480007 ATF5Q9Y2D1 282 aaPredicted RBP20.3■□□□□ 0.84
CLASP1-212ENST00000480007 C1QBPQ07021 282 aaKnown RBP20.25■□□□□ 0.83
CLASP1-212ENST00000480007 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
CLASP1-212ENST00000480007 ZNF219Q9P2Y4 722 aaPredicted RBP19.98■□□□□ 0.79
CLASP1-212ENST00000480007 CAPN15O75808 1086 aa19.95■□□□□ 0.78
CLASP1-212ENST00000480007 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
CLASP1-212ENST00000480007 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
CLASP1-212ENST00000480007 CACNB1Q02641 598 aaPredicted RBP19.7■□□□□ 0.74
CLASP1-212ENST00000480007 POLA2Q14181 598 aa19.67■□□□□ 0.74
CLASP1-212ENST00000480007 ABCB7O75027 752 aa19.59■□□□□ 0.73
CLASP1-212ENST00000480007 DSG3P32926 999 aa19.58■□□□□ 0.72
CLASP1-212ENST00000480007 MKRN4PQ13434 485 aaPredicted RBP19.45■□□□□ 0.7
CLASP1-212ENST00000480007 FBLN2P98095 1184 aa19.44■□□□□ 0.7
CLASP1-212ENST00000480007 FKBP8Q14318 412 aa19.43■□□□□ 0.7
CLASP1-212ENST00000480007 ZBTB12Q9Y330 459 aaPredicted RBP19.43■□□□□ 0.7
CLASP1-212ENST00000480007 SPDYE4A6NLX3 237 aa19.14■□□□□ 0.65
CLASP1-212ENST00000480007 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
CLASP1-212ENST00000480007 PROM2Q8N271 834 aa18.92■□□□□ 0.62
CLASP1-212ENST00000480007 SPDYE2BA6NHP3 402 aa18.9■□□□□ 0.62
CLASP1-212ENST00000480007 SPDYE6P0CI01 402 aa18.9■□□□□ 0.62
CLASP1-212ENST00000480007 SPDYE2Q495Y8 402 aa18.9■□□□□ 0.62
CLASP1-212ENST00000480007 ZNF692Q9BU19 519 aaPredicted RBP18.85■□□□□ 0.61
CLASP1-212ENST00000480007 SSUH2Q9Y2M2 353 aa18.81■□□□□ 0.6
CLASP1-212ENST00000480007 FBXO3Q9UK99 471 aa18.68■□□□□ 0.58
CLASP1-212ENST00000480007 RBM42Q9BTD8 480 aaKnown RBP18.67■□□□□ 0.58
CLASP1-212ENST00000480007 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
CLASP1-212ENST00000480007 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
CLASP1-212ENST00000480007 VASPP50552 380 aaPredicted RBP18.43■□□□□ 0.54
CLASP1-212ENST00000480007 STAG3Q9UJ98 1225 aa18.38■□□□□ 0.53
CLASP1-212ENST00000480007 REM2Q8IYK8 340 aaPredicted RBP18.3■□□□□ 0.52
CLASP1-212ENST00000480007 SPDYE1Q8NFV5 336 aaPredicted RBP18.28■□□□□ 0.52
CLASP1-212ENST00000480007 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
CLASP1-212ENST00000480007 IFNLR1Q8IU57 520 aaPredicted RBP18.18■□□□□ 0.5
CLASP1-212ENST00000480007 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
CLASP1-212ENST00000480007 CLEC11AQ9Y240 323 aa18.14■□□□□ 0.49
CLASP1-212ENST00000480007 PLCD3Q8N3E9 789 aa18.11■□□□□ 0.49
CLASP1-212ENST00000480007 PITPNM1O00562 1244 aa18.09■□□□□ 0.49
CLASP1-212ENST00000480007 MIER1Q8N108 512 aa18.09■□□□□ 0.49
CLASP1-212ENST00000480007 PRR29P0C7W0 189 aa18.03■□□□□ 0.48
CLASP1-212ENST00000480007 PLEKHG5O94827 1062 aa18.01■□□□□ 0.47
CLASP1-212ENST00000480007 KLHL34Q8N239 644 aa17.99■□□□□ 0.47
CLASP1-212ENST00000480007 ZBTB47Q9UFB7 747 aaPredicted RBP17.93■□□□□ 0.46
CLASP1-212ENST00000480007 SPOCK2Q92563 424 aa17.92■□□□□ 0.46
CLASP1-212ENST00000480007 CREBZFQ9NS37 354 aa17.89■□□□□ 0.45
CLASP1-212ENST00000480007 CHRDL2Q6WN34 429 aa17.76■□□□□ 0.43
CLASP1-212ENST00000480007 MNX1P50219 401 aaPredicted RBP17.75■□□□□ 0.43
CLASP1-212ENST00000480007 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLASP1-212ENST00000480007 PKD2Q13563 968 aa17.69■□□□□ 0.42
CLASP1-212ENST00000480007 CHADLQ6NUI6 762 aa17.67■□□□□ 0.42
CLASP1-212ENST00000480007 NUBP1P53384 320 aa17.64■□□□□ 0.41
CLASP1-212ENST00000480007 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
CLASP1-212ENST00000480007 NPM1P06748 294 aaKnown RBP eCLIP17.59■□□□□ 0.41
CLASP1-212ENST00000480007 PIP4P2Q8N4L2 257 aa17.59■□□□□ 0.41
CLASP1-212ENST00000480007 CIZ1Q9ULV3 898 aaPredicted RBP17.56■□□□□ 0.4
CLASP1-212ENST00000480007 FARP1Q9Y4F1 1045 aaPredicted RBP17.56■□□□□ 0.4
CLASP1-212ENST00000480007 GSE1Q14687 1217 aa17.52■□□□□ 0.4
CLASP1-212ENST00000480007 ECM2O94769 699 aaPredicted RBP17.51■□□□□ 0.39
CLASP1-212ENST00000480007 FAM212AQ96EL1 285 aa17.5■□□□□ 0.39
CLASP1-212ENST00000480007 RASEFQ8IZ41 740 aa17.49■□□□□ 0.39
CLASP1-212ENST00000480007 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
CLASP1-212ENST00000480007 DCAF8Q5TAQ9 597 aa17.45■□□□□ 0.38
CLASP1-212ENST00000480007 RGL2O15211 777 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms