RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
GPATCH8-206ENST00000588554 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
GPATCH8-206ENST00000588554 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
GPATCH8-206ENST00000588554 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
GPATCH8-206ENST00000588554 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
GPATCH8-206ENST00000588554 FOXD1Q16676 465 aa18.66■□□□□ 0.58
GPATCH8-206ENST00000588554 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
GPATCH8-206ENST00000588554 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
GPATCH8-206ENST00000588554 PPP6R1Q9UPN7 881 aa17.66■□□□□ 0.42
GPATCH8-206ENST00000588554 ADRA2BP18089 450 aa17.64■□□□□ 0.41
GPATCH8-206ENST00000588554 PIAS4Q8N2W9 510 aaPredicted RBP17.55■□□□□ 0.4
GPATCH8-206ENST00000588554 MSH5O43196 834 aa17.41■□□□□ 0.38
GPATCH8-206ENST00000588554 ABCC9O60706 1549 aa16.95■□□□□ 0.3
GPATCH8-206ENST00000588554 CCDC180Q9P1Z9 1646 aa16.79■□□□□ 0.28
GPATCH8-206ENST00000588554 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
GPATCH8-206ENST00000588554 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
GPATCH8-206ENST00000588554 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
GPATCH8-206ENST00000588554 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
GPATCH8-206ENST00000588554 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.16
GPATCH8-206ENST00000588554 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
GPATCH8-206ENST00000588554 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
GPATCH8-206ENST00000588554 NACADO15069 1562 aa15.91■□□□□ 0.14
GPATCH8-206ENST00000588554 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
GPATCH8-206ENST00000588554 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
GPATCH8-206ENST00000588554 UNC13AQ9UPW8 1703 aa15.69■□□□□ 0.1
GPATCH8-206ENST00000588554 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
GPATCH8-206ENST00000588554 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
GPATCH8-206ENST00000588554 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
GPATCH8-206ENST00000588554 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
GPATCH8-206ENST00000588554 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
GPATCH8-206ENST00000588554 RNF216Q9NWF9 866 aaPredicted RBP15.49■□□□□ 0.07
GPATCH8-206ENST00000588554 DCAF1Q9Y4B6 1507 aa15.47■□□□□ 0.07
GPATCH8-206ENST00000588554 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
GPATCH8-206ENST00000588554 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
GPATCH8-206ENST00000588554 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
GPATCH8-206ENST00000588554 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
GPATCH8-206ENST00000588554 KCNA4P22459 653 aa15.26■□□□□ 0.03
GPATCH8-206ENST00000588554 SHROOM4Q9ULL8 1493 aa15.25■□□□□ 0.03
GPATCH8-206ENST00000588554 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
GPATCH8-206ENST00000588554 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.03
GPATCH8-206ENST00000588554 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
GPATCH8-206ENST00000588554 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
GPATCH8-206ENST00000588554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
GPATCH8-206ENST00000588554 NCAPD3P42695 1498 aa14.73□□□□□ -0.05
GPATCH8-206ENST00000588554 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
GPATCH8-206ENST00000588554 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
GPATCH8-206ENST00000588554 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
GPATCH8-206ENST00000588554 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
GPATCH8-206ENST00000588554 NESP48681 1621 aa14.59□□□□□ -0.07
GPATCH8-206ENST00000588554 DNAJC5Q9H3Z4 198 aa14.58□□□□□ -0.08
GPATCH8-206ENST00000588554 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
GPATCH8-206ENST00000588554 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
GPATCH8-206ENST00000588554 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
GPATCH8-206ENST00000588554 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
GPATCH8-206ENST00000588554 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
GPATCH8-206ENST00000588554 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
GPATCH8-206ENST00000588554 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
GPATCH8-206ENST00000588554 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
GPATCH8-206ENST00000588554 CUX2O14529 1486 aa14.48□□□□□ -0.09
GPATCH8-206ENST00000588554 U3KPZ7 1027 aaPredicted RBP14.47□□□□□ -0.09
GPATCH8-206ENST00000588554 WIZO95785 1651 aa14.39□□□□□ -0.11
GPATCH8-206ENST00000588554 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
GPATCH8-206ENST00000588554 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
GPATCH8-206ENST00000588554 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.12
GPATCH8-206ENST00000588554 CADPSQ9ULU8 1353 aa14.3□□□□□ -0.12
GPATCH8-206ENST00000588554 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
GPATCH8-206ENST00000588554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
GPATCH8-206ENST00000588554 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
GPATCH8-206ENST00000588554 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
GPATCH8-206ENST00000588554 APLP2Q06481 763 aa14.22□□□□□ -0.13
GPATCH8-206ENST00000588554 CAPN15O75808 1086 aa14.19□□□□□ -0.14
GPATCH8-206ENST00000588554 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
GPATCH8-206ENST00000588554 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
GPATCH8-206ENST00000588554 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
GPATCH8-206ENST00000588554 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
GPATCH8-206ENST00000588554 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
GPATCH8-206ENST00000588554 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
GPATCH8-206ENST00000588554 WDR62O43379 1518 aa14.13□□□□□ -0.15
GPATCH8-206ENST00000588554 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
GPATCH8-206ENST00000588554 CFTRP13569 1480 aa14.12□□□□□ -0.15
GPATCH8-206ENST00000588554 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
GPATCH8-206ENST00000588554 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
GPATCH8-206ENST00000588554 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
GPATCH8-206ENST00000588554 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
GPATCH8-206ENST00000588554 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
GPATCH8-206ENST00000588554 ZBTB22O15209 634 aa14□□□□□ -0.17
GPATCH8-206ENST00000588554 DSG3P32926 999 aa14□□□□□ -0.17
GPATCH8-206ENST00000588554 TRIM41Q8WV44 630 aa14□□□□□ -0.17
GPATCH8-206ENST00000588554 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
GPATCH8-206ENST00000588554 POTEHQ6S545 545 aa13.91□□□□□ -0.18
GPATCH8-206ENST00000588554 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.18
GPATCH8-206ENST00000588554 PRDM2Q13029 1718 aa13.89□□□□□ -0.19
GPATCH8-206ENST00000588554 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
GPATCH8-206ENST00000588554 ABCB7O75027 752 aa13.86□□□□□ -0.19
GPATCH8-206ENST00000588554 IFT140Q96RY7 1462 aa13.83□□□□□ -0.2
GPATCH8-206ENST00000588554 AQRO60306 1485 aaKnown RBP eCLIP13.79□□□□□ -0.2
GPATCH8-206ENST00000588554 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
GPATCH8-206ENST00000588554 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
GPATCH8-206ENST00000588554 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
GPATCH8-206ENST00000588554 RAD54L2Q9Y4B4 1467 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms