RNA–Protein interactions for RNA: ENST00000592154.1

GPATCH8-209, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-209ENST00000592154 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
GPATCH8-209ENST00000592154 ABCC9O60706 1549 aa21.74■■□□□ 1.07
GPATCH8-209ENST00000592154 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
GPATCH8-209ENST00000592154 DNAJC5BQ9UF47 199 aa20.81■□□□□ 0.92
GPATCH8-209ENST00000592154 RB1CC1Q8TDY2 1594 aa20.5■□□□□ 0.87
GPATCH8-209ENST00000592154 NACADO15069 1562 aa20.18■□□□□ 0.82
GPATCH8-209ENST00000592154 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
GPATCH8-209ENST00000592154 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
GPATCH8-209ENST00000592154 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
GPATCH8-209ENST00000592154 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
GPATCH8-209ENST00000592154 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
GPATCH8-209ENST00000592154 MYO15BQ96JP2 1530 aa19.67■□□□□ 0.74
GPATCH8-209ENST00000592154 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
GPATCH8-209ENST00000592154 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
GPATCH8-209ENST00000592154 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
GPATCH8-209ENST00000592154 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
GPATCH8-209ENST00000592154 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
GPATCH8-209ENST00000592154 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
GPATCH8-209ENST00000592154 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
GPATCH8-209ENST00000592154 ZCCHC6Q5VYS8 1495 aaKnown RBP19.19■□□□□ 0.66
GPATCH8-209ENST00000592154 CUX2O14529 1486 aa19.03■□□□□ 0.64
GPATCH8-209ENST00000592154 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
GPATCH8-209ENST00000592154 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
GPATCH8-209ENST00000592154 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
GPATCH8-209ENST00000592154 THOC2Q8NI27 1593 aaKnown RBP18.54■□□□□ 0.56
GPATCH8-209ENST00000592154 NESP48681 1621 aa18.5■□□□□ 0.55
GPATCH8-209ENST00000592154 TRIM41Q8WV44 630 aa18.5■□□□□ 0.55
GPATCH8-209ENST00000592154 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
GPATCH8-209ENST00000592154 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
GPATCH8-209ENST00000592154 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
GPATCH8-209ENST00000592154 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
GPATCH8-209ENST00000592154 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
GPATCH8-209ENST00000592154 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
GPATCH8-209ENST00000592154 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
GPATCH8-209ENST00000592154 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
GPATCH8-209ENST00000592154 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
GPATCH8-209ENST00000592154 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
GPATCH8-209ENST00000592154 WDR62O43379 1518 aa18.1■□□□□ 0.49
GPATCH8-209ENST00000592154 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
GPATCH8-209ENST00000592154 CADPSQ9ULU8 1353 aa17.95■□□□□ 0.46
GPATCH8-209ENST00000592154 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
GPATCH8-209ENST00000592154 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
GPATCH8-209ENST00000592154 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
GPATCH8-209ENST00000592154 OSCARQ8IYS5 282 aa17.93■□□□□ 0.46
GPATCH8-209ENST00000592154 MROH2BQ7Z745 1585 aa17.92■□□□□ 0.46
GPATCH8-209ENST00000592154 CEP164Q9UPV0 1460 aa17.91■□□□□ 0.46
GPATCH8-209ENST00000592154 FANCD2Q9BXW9 1451 aa17.81■□□□□ 0.44
GPATCH8-209ENST00000592154 ARHGEF11O15085 1522 aa17.77■□□□□ 0.43
GPATCH8-209ENST00000592154 WIZO95785 1651 aa17.74■□□□□ 0.43
GPATCH8-209ENST00000592154 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.43
GPATCH8-209ENST00000592154 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
GPATCH8-209ENST00000592154 CFTRP13569 1480 aa17.65■□□□□ 0.42
GPATCH8-209ENST00000592154 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
GPATCH8-209ENST00000592154 CHD1O14646 1710 aa17.58■□□□□ 0.4
GPATCH8-209ENST00000592154 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
GPATCH8-209ENST00000592154 EIF4G3O43432 1585 aaKnown RBP17.55■□□□□ 0.4
GPATCH8-209ENST00000592154 CYB5RLQ6IPT4 315 aa17.55■□□□□ 0.4
GPATCH8-209ENST00000592154 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
GPATCH8-209ENST00000592154 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
GPATCH8-209ENST00000592154 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
GPATCH8-209ENST00000592154 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
GPATCH8-209ENST00000592154 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
GPATCH8-209ENST00000592154 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
GPATCH8-209ENST00000592154 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
GPATCH8-209ENST00000592154 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
GPATCH8-209ENST00000592154 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.36
GPATCH8-209ENST00000592154 CLASP1Q7Z460 1538 aa17.27■□□□□ 0.36
GPATCH8-209ENST00000592154 FBLN2P98095 1184 aa17.27■□□□□ 0.36
GPATCH8-209ENST00000592154 SYNJ1O43426 1573 aa17.22■□□□□ 0.35
GPATCH8-209ENST00000592154 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
GPATCH8-209ENST00000592154 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
GPATCH8-209ENST00000592154 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
GPATCH8-209ENST00000592154 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
GPATCH8-209ENST00000592154 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
GPATCH8-209ENST00000592154 MAGI1Q96QZ7 1491 aaPredicted RBP17.1■□□□□ 0.33
GPATCH8-209ENST00000592154 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
GPATCH8-209ENST00000592154 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
GPATCH8-209ENST00000592154 PBRM1Q86U86 1689 aa17.06■□□□□ 0.32
GPATCH8-209ENST00000592154 CHMP7Q8WUX9 453 aaPredicted RBP17.05■□□□□ 0.32
GPATCH8-209ENST00000592154 SOGA1O94964 1423 aa17.04■□□□□ 0.32
GPATCH8-209ENST00000592154 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
GPATCH8-209ENST00000592154 KIF13AQ9H1H9 1805 aa17.02■□□□□ 0.31
GPATCH8-209ENST00000592154 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
GPATCH8-209ENST00000592154 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
GPATCH8-209ENST00000592154 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
GPATCH8-209ENST00000592154 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
GPATCH8-209ENST00000592154 CUX1P39880 1505 aa16.89■□□□□ 0.29
GPATCH8-209ENST00000592154 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
GPATCH8-209ENST00000592154 ABCA5Q8WWZ7 1642 aa16.87■□□□□ 0.29
GPATCH8-209ENST00000592154 ILDR1Q86SU0 546 aaPredicted RBP16.84■□□□□ 0.29
GPATCH8-209ENST00000592154 SHROOM2Q13796 1616 aa16.84■□□□□ 0.29
GPATCH8-209ENST00000592154 GRIN2AQ12879 1464 aa16.81■□□□□ 0.28
GPATCH8-209ENST00000592154 ADAMTS12P58397 1594 aa16.79■□□□□ 0.28
GPATCH8-209ENST00000592154 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
GPATCH8-209ENST00000592154 NUP160Q12769 1436 aa16.76■□□□□ 0.27
GPATCH8-209ENST00000592154 KDM6BO15054 1643 aa16.75■□□□□ 0.27
GPATCH8-209ENST00000592154 DIP2BQ9P265 1576 aa16.73■□□□□ 0.27
GPATCH8-209ENST00000592154 ABCC10Q5T3U5 1492 aa16.71■□□□□ 0.27
GPATCH8-209ENST00000592154 TSPOAP1O95153 1857 aa16.7■□□□□ 0.26
GPATCH8-209ENST00000592154 KDM4FA0A1W2PPD8 638 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms