RNA–Protein interactions for RNA: ENST00000296127.7

ZDHHC3-201, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 1 (best) BASIC

Gene ZDHHC3, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-201ENST00000296127 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
ZDHHC3-201ENST00000296127 HRCP23327 699 aa25.12■■□□□ 1.61
ZDHHC3-201ENST00000296127 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
ZDHHC3-201ENST00000296127 PELP1Q8IZL8 1130 aaKnown RBP24.62■■□□□ 1.53
ZDHHC3-201ENST00000296127 PCGF6Q9BYE7 350 aa24.53■■□□□ 1.52
ZDHHC3-201ENST00000296127 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
ZDHHC3-201ENST00000296127 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.46
ZDHHC3-201ENST00000296127 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
ZDHHC3-201ENST00000296127 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
ZDHHC3-201ENST00000296127 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
ZDHHC3-201ENST00000296127 MYT1Q01538 1121 aa23.68■■□□□ 1.38
ZDHHC3-201ENST00000296127 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
ZDHHC3-201ENST00000296127 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
ZDHHC3-201ENST00000296127 TRIM26Q12899 539 aaPredicted RBP23.46■■□□□ 1.35
ZDHHC3-201ENST00000296127 NEUROD1Q13562 356 aa23.29■■□□□ 1.32
ZDHHC3-201ENST00000296127 ACIN1Q9UKV3 1341 aaKnown RBP23.28■■□□□ 1.32
ZDHHC3-201ENST00000296127 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
ZDHHC3-201ENST00000296127 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
ZDHHC3-201ENST00000296127 GTF3C3Q9Y5Q9 886 aa23.19■■□□□ 1.3
ZDHHC3-201ENST00000296127 CENPBP07199 599 aaPredicted RBP22.83■■□□□ 1.24
ZDHHC3-201ENST00000296127 DIEXFQ68CQ4 756 aaKnown RBP22.68■■□□□ 1.22
ZDHHC3-201ENST00000296127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
ZDHHC3-201ENST00000296127 ABCC9O60706 1549 aa22.54■■□□□ 1.2
ZDHHC3-201ENST00000296127 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
ZDHHC3-201ENST00000296127 YTHDC1Q96MU7 727 aaKnown RBP22.52■■□□□ 1.2
ZDHHC3-201ENST00000296127 CCER1Q8TC90 406 aaPredicted RBP22.48■■□□□ 1.19
ZDHHC3-201ENST00000296127 EHMT2Q96KQ7 1210 aa22.48■■□□□ 1.19
ZDHHC3-201ENST00000296127 BCL11AQ9H165 835 aa22.46■■□□□ 1.19
ZDHHC3-201ENST00000296127 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
ZDHHC3-201ENST00000296127 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
ZDHHC3-201ENST00000296127 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
ZDHHC3-201ENST00000296127 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
ZDHHC3-201ENST00000296127 ANP32EQ9BTT0 268 aa22.15■■□□□ 1.14
ZDHHC3-201ENST00000296127 MIER1Q8N108 512 aa22.13■■□□□ 1.13
ZDHHC3-201ENST00000296127 ZNF316A6NFI3 1004 aaPredicted RBP22.09■■□□□ 1.13
ZDHHC3-201ENST00000296127 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
ZDHHC3-201ENST00000296127 TSHZ2Q9NRE2 1034 aa21.97■■□□□ 1.11
ZDHHC3-201ENST00000296127 SUPT16HQ9Y5B9 1047 aaKnown RBP21.93■■□□□ 1.1
ZDHHC3-201ENST00000296127 PRKCSHP14314 528 aaPredicted RBP21.83■■□□□ 1.09
ZDHHC3-201ENST00000296127 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
ZDHHC3-201ENST00000296127 NACADO15069 1562 aa21.6■■□□□ 1.05
ZDHHC3-201ENST00000296127 BCANQ96GW7 911 aa21.55■■□□□ 1.04
ZDHHC3-201ENST00000296127 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
ZDHHC3-201ENST00000296127 RSF1Q96T23 1441 aaPredicted RBP21.53■■□□□ 1.04
ZDHHC3-201ENST00000296127 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
ZDHHC3-201ENST00000296127 RBM19Q9Y4C8 960 aaKnown RBP21.39■■□□□ 1.01
ZDHHC3-201ENST00000296127 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
ZDHHC3-201ENST00000296127 MSH5O43196 834 aa21.32■■□□□ 1
ZDHHC3-201ENST00000296127 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
ZDHHC3-201ENST00000296127 FKBP8Q14318 412 aa21.3■■□□□ 1
ZDHHC3-201ENST00000296127 KCNH8Q96L42 1107 aa21.29■■□□□ 1
ZDHHC3-201ENST00000296127 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
ZDHHC3-201ENST00000296127 ITGAEP38570 1179 aa21.22■□□□□ 0.99
ZDHHC3-201ENST00000296127 DNAJC5BQ9UF47 199 aa21.21■□□□□ 0.99
ZDHHC3-201ENST00000296127 ANO8Q9HCE9 1232 aaPredicted RBP21.12■□□□□ 0.97
ZDHHC3-201ENST00000296127 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
ZDHHC3-201ENST00000296127 ERICH6Q7L0X2 663 aa21.09■□□□□ 0.97
ZDHHC3-201ENST00000296127 UBTFP17480 764 aaKnown RBP21.03■□□□□ 0.96
ZDHHC3-201ENST00000296127 DEKP35659 375 aaKnown RBP21■□□□□ 0.95
ZDHHC3-201ENST00000296127 TNIKQ9UKE5 1360 aa20.99■□□□□ 0.95
ZDHHC3-201ENST00000296127 SCRIBQ14160 1630 aa20.99■□□□□ 0.95
ZDHHC3-201ENST00000296127 NEFLP07196 543 aa20.96■□□□□ 0.95
ZDHHC3-201ENST00000296127 ABCC8Q09428 1581 aa20.94■□□□□ 0.94
ZDHHC3-201ENST00000296127 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
ZDHHC3-201ENST00000296127 SOGA1O94964 1423 aa20.92■□□□□ 0.94
ZDHHC3-201ENST00000296127 APLP2Q06481 763 aa20.89■□□□□ 0.93
ZDHHC3-201ENST00000296127 FANCIQ9NVI1 1328 aa20.89■□□□□ 0.93
ZDHHC3-201ENST00000296127 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
ZDHHC3-201ENST00000296127 TRIM52Q96A61 297 aa20.87■□□□□ 0.93
ZDHHC3-201ENST00000296127 SALL2Q9Y467 1007 aaPredicted RBP20.87■□□□□ 0.93
ZDHHC3-201ENST00000296127 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
ZDHHC3-201ENST00000296127 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
ZDHHC3-201ENST00000296127 CCDC136Q96JN2 1154 aa20.81■□□□□ 0.92
ZDHHC3-201ENST00000296127 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
ZDHHC3-201ENST00000296127 PABPN1Q86U42 306 aaKnown RBP eCLIP20.78■□□□□ 0.92
ZDHHC3-201ENST00000296127 WIZO95785 1651 aa20.77■□□□□ 0.92
ZDHHC3-201ENST00000296127 IRX6P78412 446 aaPredicted RBP20.77■□□□□ 0.92
ZDHHC3-201ENST00000296127 DDX10Q13206 875 aaKnown RBP20.77■□□□□ 0.92
ZDHHC3-201ENST00000296127 EIF4G1Q04637 1599 aaKnown RBP20.77■□□□□ 0.91
ZDHHC3-201ENST00000296127 NBR1Q14596 966 aa20.74■□□□□ 0.91
ZDHHC3-201ENST00000296127 CDK11AQ9UQ88 783 aaPredicted RBP20.73■□□□□ 0.91
ZDHHC3-201ENST00000296127 MYT1LQ9UL68 1186 aa20.71■□□□□ 0.91
ZDHHC3-201ENST00000296127 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
ZDHHC3-201ENST00000296127 GOLGA3Q08378 1498 aa20.65■□□□□ 0.9
ZDHHC3-201ENST00000296127 CLIP1P30622 1438 aa20.63■□□□□ 0.89
ZDHHC3-201ENST00000296127 RTN4Q9NQC3 1192 aaKnown RBP20.62■□□□□ 0.89
ZDHHC3-201ENST00000296127 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.61■□□□□ 0.89
ZDHHC3-201ENST00000296127 IL27Q8NEV9 243 aa20.6■□□□□ 0.89
ZDHHC3-201ENST00000296127 PAK3O75914 559 aaPredicted RBP20.59■□□□□ 0.89
ZDHHC3-201ENST00000296127 HIRIP3Q9BW71 556 aaPredicted RBP20.59■□□□□ 0.89
ZDHHC3-201ENST00000296127 CC2D2AQ9P2K1 1620 aa20.57■□□□□ 0.88
ZDHHC3-201ENST00000296127 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
ZDHHC3-201ENST00000296127 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.88
ZDHHC3-201ENST00000296127 NOP58Q9Y2X3 529 aaKnown RBP20.52■□□□□ 0.88
ZDHHC3-201ENST00000296127 EEA1Q15075 1411 aa20.52■□□□□ 0.87
ZDHHC3-201ENST00000296127 ERICH6BQ5W0A0 696 aa20.51■□□□□ 0.87
ZDHHC3-201ENST00000296127 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
ZDHHC3-201ENST00000296127 ANP32CO43423 234 aa20.45■□□□□ 0.86
ZDHHC3-201ENST00000296127 CCER2I3L3R5 266 aa20.45■□□□□ 0.86
ZDHHC3-201ENST00000296127 UBE2Q2Q8WVN8 375 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms