RNA–Protein interactions for RNA: ENST00000339420.6

ZDHHC3-202, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 2

Gene ZDHHC3, Length 3,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-202ENST00000339420 NISCHQ9Y2I1 1504 aa19.74■□□□□ 0.75
ZDHHC3-202ENST00000339420 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
ZDHHC3-202ENST00000339420 SUPT5HO00267 1087 aaKnown RBP17.54■□□□□ 0.4
ZDHHC3-202ENST00000339420 HRCP23327 699 aa17.4■□□□□ 0.38
ZDHHC3-202ENST00000339420 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
ZDHHC3-202ENST00000339420 PCGF6Q9BYE7 350 aa17.34■□□□□ 0.37
ZDHHC3-202ENST00000339420 CCDC180Q9P1Z9 1646 aa17.15■□□□□ 0.34
ZDHHC3-202ENST00000339420 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
ZDHHC3-202ENST00000339420 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
ZDHHC3-202ENST00000339420 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
ZDHHC3-202ENST00000339420 DCAF8L2P0C7V8 631 aa16.75■□□□□ 0.27
ZDHHC3-202ENST00000339420 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
ZDHHC3-202ENST00000339420 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
ZDHHC3-202ENST00000339420 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
ZDHHC3-202ENST00000339420 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
ZDHHC3-202ENST00000339420 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
ZDHHC3-202ENST00000339420 DCAF1Q9Y4B6 1507 aa16.43■□□□□ 0.22
ZDHHC3-202ENST00000339420 FAM9AQ8IZU1 332 aaPredicted RBP16.33■□□□□ 0.2
ZDHHC3-202ENST00000339420 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
ZDHHC3-202ENST00000339420 NEUROD1Q13562 356 aa16.16■□□□□ 0.18
ZDHHC3-202ENST00000339420 GTF3C3Q9Y5Q9 886 aa16.1■□□□□ 0.17
ZDHHC3-202ENST00000339420 ACIN1Q9UKV3 1341 aaKnown RBP16.09■□□□□ 0.17
ZDHHC3-202ENST00000339420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.17
ZDHHC3-202ENST00000339420 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
ZDHHC3-202ENST00000339420 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
ZDHHC3-202ENST00000339420 CCER1Q8TC90 406 aaPredicted RBP16.01■□□□□ 0.15
ZDHHC3-202ENST00000339420 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
ZDHHC3-202ENST00000339420 CENPBP07199 599 aaPredicted RBP15.92■□□□□ 0.14
ZDHHC3-202ENST00000339420 DIEXFQ68CQ4 756 aaKnown RBP15.92■□□□□ 0.14
ZDHHC3-202ENST00000339420 ABCC9O60706 1549 aa15.82■□□□□ 0.12
ZDHHC3-202ENST00000339420 MYT1Q01538 1121 aa15.82■□□□□ 0.12
ZDHHC3-202ENST00000339420 NACADO15069 1562 aa15.74■□□□□ 0.11
ZDHHC3-202ENST00000339420 SCRIBQ14160 1630 aa15.67■□□□□ 0.1
ZDHHC3-202ENST00000339420 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
ZDHHC3-202ENST00000339420 MIER1Q8N108 512 aa15.54■□□□□ 0.08
ZDHHC3-202ENST00000339420 ZNF316A6NFI3 1004 aaPredicted RBP15.53■□□□□ 0.08
ZDHHC3-202ENST00000339420 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
ZDHHC3-202ENST00000339420 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
ZDHHC3-202ENST00000339420 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
ZDHHC3-202ENST00000339420 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
ZDHHC3-202ENST00000339420 RANGAP1P46060 587 aaPredicted RBP15.29■□□□□ 0.04
ZDHHC3-202ENST00000339420 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
ZDHHC3-202ENST00000339420 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
ZDHHC3-202ENST00000339420 BCANQ96GW7 911 aa15.23■□□□□ 0.03
ZDHHC3-202ENST00000339420 SUPT16HQ9Y5B9 1047 aaKnown RBP15.23■□□□□ 0.03
ZDHHC3-202ENST00000339420 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
ZDHHC3-202ENST00000339420 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
ZDHHC3-202ENST00000339420 WIZO95785 1651 aa15.19■□□□□ 0.02
ZDHHC3-202ENST00000339420 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
ZDHHC3-202ENST00000339420 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
ZDHHC3-202ENST00000339420 TSHZ2Q9NRE2 1034 aa15.15■□□□□ 0.02
ZDHHC3-202ENST00000339420 ANP32EQ9BTT0 268 aa15.13■□□□□ 0.01
ZDHHC3-202ENST00000339420 SMARCA4P51532 1647 aa15.13■□□□□ 0.01
ZDHHC3-202ENST00000339420 SOGA1O94964 1423 aa15.09■□□□□ 0.01
ZDHHC3-202ENST00000339420 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
ZDHHC3-202ENST00000339420 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0.01
ZDHHC3-202ENST00000339420 CCDC88BA6NC98 1476 aa15.08■□□□□ 0
ZDHHC3-202ENST00000339420 ABCC8Q09428 1581 aa15.08■□□□□ 0
ZDHHC3-202ENST00000339420 APLP2Q06481 763 aa15.04■□□□□ -0
ZDHHC3-202ENST00000339420 WRNQ14191 1432 aaPredicted RBP eCLIP15.04■□□□□ -0
ZDHHC3-202ENST00000339420 KCNH8Q96L42 1107 aa15.04■□□□□ -0
ZDHHC3-202ENST00000339420 BICRAQ9NZM4 1560 aa15.03■□□□□ -0
ZDHHC3-202ENST00000339420 RUSC2Q8N2Y8 1516 aa15□□□□□ -0.01
ZDHHC3-202ENST00000339420 TNIKQ9UKE5 1360 aa14.98□□□□□ -0.01
ZDHHC3-202ENST00000339420 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
ZDHHC3-202ENST00000339420 FKBP8Q14318 412 aa14.96□□□□□ -0.01
ZDHHC3-202ENST00000339420 ITGAEP38570 1179 aa14.95□□□□□ -0.02
ZDHHC3-202ENST00000339420 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
ZDHHC3-202ENST00000339420 CLSPNQ9HAW4 1339 aa14.86□□□□□ -0.03
ZDHHC3-202ENST00000339420 TRIM52Q96A61 297 aa14.83□□□□□ -0.04
ZDHHC3-202ENST00000339420 CLIP1P30622 1438 aa14.82□□□□□ -0.04
ZDHHC3-202ENST00000339420 RBM19Q9Y4C8 960 aaKnown RBP14.82□□□□□ -0.04
ZDHHC3-202ENST00000339420 HIRIP3Q9BW71 556 aaPredicted RBP14.81□□□□□ -0.04
ZDHHC3-202ENST00000339420 GOLGA3Q08378 1498 aa14.81□□□□□ -0.04
ZDHHC3-202ENST00000339420 NEFLP07196 543 aa14.8□□□□□ -0.04
ZDHHC3-202ENST00000339420 DDX10Q13206 875 aaKnown RBP14.8□□□□□ -0.04
ZDHHC3-202ENST00000339420 DHX57Q6P158 1386 aaKnown RBP14.77□□□□□ -0.04
ZDHHC3-202ENST00000339420 IRX6P78412 446 aaPredicted RBP14.73□□□□□ -0.05
ZDHHC3-202ENST00000339420 KANK4Q5T7N3 995 aaPredicted RBP14.71□□□□□ -0.05
ZDHHC3-202ENST00000339420 ERICH6Q7L0X2 663 aa14.71□□□□□ -0.05
ZDHHC3-202ENST00000339420 VPS8Q8N3P4 1428 aa14.69□□□□□ -0.06
ZDHHC3-202ENST00000339420 MSH5O43196 834 aa14.68□□□□□ -0.06
ZDHHC3-202ENST00000339420 EEA1Q15075 1411 aa14.67□□□□□ -0.06
ZDHHC3-202ENST00000339420 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
ZDHHC3-202ENST00000339420 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
ZDHHC3-202ENST00000339420 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
ZDHHC3-202ENST00000339420 RAPGEF2Q9Y4G8 1499 aa14.62□□□□□ -0.07
ZDHHC3-202ENST00000339420 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
ZDHHC3-202ENST00000339420 HMGXB3Q12766 1538 aa14.58□□□□□ -0.07
ZDHHC3-202ENST00000339420 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
ZDHHC3-202ENST00000339420 ANP32CO43423 234 aa14.54□□□□□ -0.08
ZDHHC3-202ENST00000339420 SYNJ1O43426 1573 aa14.52□□□□□ -0.08
ZDHHC3-202ENST00000339420 CDK11AQ9UQ88 783 aaPredicted RBP14.52□□□□□ -0.08
ZDHHC3-202ENST00000339420 KIF21BO75037 1637 aa14.52□□□□□ -0.08
ZDHHC3-202ENST00000339420 ATP1B4Q9UN42 357 aaPredicted RBP14.51□□□□□ -0.09
ZDHHC3-202ENST00000339420 HNRNPUQ00839 825 aaKnown RBP eCLIP14.51□□□□□ -0.09
ZDHHC3-202ENST00000339420 FAM50AQ14320 339 aaKnown RBP14.51□□□□□ -0.09
ZDHHC3-202ENST00000339420 NBR1Q14596 966 aa14.51□□□□□ -0.09
ZDHHC3-202ENST00000339420 BIVM-ERCC5R4GMW8 1640 aa14.5□□□□□ -0.09
ZDHHC3-202ENST00000339420 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms