RNA–Protein interactions for RNA: ENST00000455322.6

CLASP1-208, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 5,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-208ENST00000455322 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
CLASP1-208ENST00000455322 NISCHQ9Y2I1 1504 aa14.06□□□□□ -0.16
CLASP1-208ENST00000455322 SUPT5HO00267 1087 aaKnown RBP13.96□□□□□ -0.17
CLASP1-208ENST00000455322 SHROOM4Q9ULL8 1493 aa13.76□□□□□ -0.21
CLASP1-208ENST00000455322 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
CLASP1-208ENST00000455322 APLP2Q06481 763 aa13.22□□□□□ -0.29
CLASP1-208ENST00000455322 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
CLASP1-208ENST00000455322 FAM9AQ8IZU1 332 aaPredicted RBP13.17□□□□□ -0.3
CLASP1-208ENST00000455322 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
CLASP1-208ENST00000455322 TTBK1Q5TCY1 1321 aaPredicted RBP13.09□□□□□ -0.31
CLASP1-208ENST00000455322 TRIM41Q8WV44 630 aa12.92□□□□□ -0.34
CLASP1-208ENST00000455322 RANGAP1P46060 587 aaPredicted RBP12.92□□□□□ -0.34
CLASP1-208ENST00000455322 ZEB1P37275 1124 aaPredicted RBP12.86□□□□□ -0.35
CLASP1-208ENST00000455322 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
CLASP1-208ENST00000455322 CENPBP07199 599 aaPredicted RBP12.82□□□□□ -0.36
CLASP1-208ENST00000455322 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.36
CLASP1-208ENST00000455322 UBTFP17480 764 aaKnown RBP12.75□□□□□ -0.37
CLASP1-208ENST00000455322 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
CLASP1-208ENST00000455322 PPARGC1BQ86YN6 1023 aaKnown RBP12.62□□□□□ -0.39
CLASP1-208ENST00000455322 YTHDC1Q96MU7 727 aaKnown RBP12.61□□□□□ -0.39
CLASP1-208ENST00000455322 TRIM26Q12899 539 aaPredicted RBP12.54□□□□□ -0.4
CLASP1-208ENST00000455322 NEFLP07196 543 aa12.53□□□□□ -0.4
CLASP1-208ENST00000455322 HRCP23327 699 aa12.43□□□□□ -0.42
CLASP1-208ENST00000455322 LOC105371045A0A1W2PR82 267 aa12.42□□□□□ -0.42
CLASP1-208ENST00000455322 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
CLASP1-208ENST00000455322 ITGAEP38570 1179 aa12.38□□□□□ -0.43
CLASP1-208ENST00000455322 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
CLASP1-208ENST00000455322 MYT1Q01538 1121 aa12.29□□□□□ -0.44
CLASP1-208ENST00000455322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
CLASP1-208ENST00000455322 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.44
CLASP1-208ENST00000455322 MYT1LQ9UL68 1186 aa12.23□□□□□ -0.45
CLASP1-208ENST00000455322 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
CLASP1-208ENST00000455322 DAXXQ9UER7 740 aaPredicted RBP12.14□□□□□ -0.47
CLASP1-208ENST00000455322 DIEXFQ68CQ4 756 aaKnown RBP12.11□□□□□ -0.47
CLASP1-208ENST00000455322 FAM50AQ14320 339 aaKnown RBP12.07□□□□□ -0.48
CLASP1-208ENST00000455322 ABCC9O60706 1549 aa12.06□□□□□ -0.48
CLASP1-208ENST00000455322 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLASP1-208ENST00000455322 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
CLASP1-208ENST00000455322 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
CLASP1-208ENST00000455322 NEUROD1Q13562 356 aa11.98□□□□□ -0.49
CLASP1-208ENST00000455322 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
CLASP1-208ENST00000455322 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
CLASP1-208ENST00000455322 RTL5Q5HYW3 569 aaPredicted RBP11.88□□□□□ -0.51
CLASP1-208ENST00000455322 BCANQ96GW7 911 aa11.88□□□□□ -0.51
CLASP1-208ENST00000455322 GTF3C3Q9Y5Q9 886 aa11.88□□□□□ -0.51
CLASP1-208ENST00000455322 ANP32CO43423 234 aa11.86□□□□□ -0.51
CLASP1-208ENST00000455322 ZNF326Q5BKZ1 582 aaKnown RBP11.85□□□□□ -0.51
CLASP1-208ENST00000455322 FBLN2P98095 1184 aa11.77□□□□□ -0.52
CLASP1-208ENST00000455322 P3H3Q8IVL6 736 aa11.77□□□□□ -0.52
CLASP1-208ENST00000455322 CSRNP3Q8WYN3 585 aa11.77□□□□□ -0.53
CLASP1-208ENST00000455322 CDK11AQ9UQ88 783 aaPredicted RBP11.75□□□□□ -0.53
CLASP1-208ENST00000455322 SCRIBQ14160 1630 aa11.73□□□□□ -0.53
CLASP1-208ENST00000455322 ARID3CA6NKF2 412 aa11.73□□□□□ -0.53
CLASP1-208ENST00000455322 ACIN1Q9UKV3 1341 aaKnown RBP11.7□□□□□ -0.54
CLASP1-208ENST00000455322 CANXP27824 592 aaKnown RBP11.66□□□□□ -0.54
CLASP1-208ENST00000455322 ZCCHC6Q5VYS8 1495 aaKnown RBP11.65□□□□□ -0.54
CLASP1-208ENST00000455322 ZNF777Q9ULD5 760 aaPredicted RBP11.65□□□□□ -0.54
CLASP1-208ENST00000455322 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
CLASP1-208ENST00000455322 DCAF1Q9Y4B6 1507 aa11.63□□□□□ -0.55
CLASP1-208ENST00000455322 BCL11AQ9H165 835 aa11.59□□□□□ -0.55
CLASP1-208ENST00000455322 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
CLASP1-208ENST00000455322 TONSLQ96HA7 1378 aa11.57□□□□□ -0.56
CLASP1-208ENST00000455322 NEFMP07197 916 aa11.56□□□□□ -0.56
CLASP1-208ENST00000455322 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
CLASP1-208ENST00000455322 FKBP8Q14318 412 aa11.54□□□□□ -0.56
CLASP1-208ENST00000455322 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.56
CLASP1-208ENST00000455322 DDX10Q13206 875 aaKnown RBP11.51□□□□□ -0.57
CLASP1-208ENST00000455322 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
CLASP1-208ENST00000455322 HNRNPUQ00839 825 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLASP1-208ENST00000455322 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
CLASP1-208ENST00000455322 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.57
CLASP1-208ENST00000455322 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
CLASP1-208ENST00000455322 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
CLASP1-208ENST00000455322 MYO15BQ96JP2 1530 aa11.41□□□□□ -0.58
CLASP1-208ENST00000455322 CLIP1P30622 1438 aa11.4□□□□□ -0.58
CLASP1-208ENST00000455322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.593e-7■■□□□ 12.9
CLASP1-208ENST00000455322 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
CLASP1-208ENST00000455322 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
CLASP1-208ENST00000455322 MTUS2Q5JR59 1369 aa11.38□□□□□ -0.59
CLASP1-208ENST00000455322 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
CLASP1-208ENST00000455322 MIER1Q8N108 512 aa11.37□□□□□ -0.59
CLASP1-208ENST00000455322 KDM2AQ9Y2K7 1162 aa11.35□□□□□ -0.59
CLASP1-208ENST00000455322 CCDC136Q96JN2 1154 aa11.35□□□□□ -0.59
CLASP1-208ENST00000455322 HIRIP3Q9BW71 556 aaPredicted RBP11.35□□□□□ -0.59
CLASP1-208ENST00000455322 MRS2Q9HD23 443 aa11.35□□□□□ -0.59
CLASP1-208ENST00000455322 UPF2Q9HAU5 1272 aaKnown RBP11.34□□□□□ -0.59
CLASP1-208ENST00000455322 HSP90AA1P07900 732 aaKnown RBP11.34□□□□□ -0.59
CLASP1-208ENST00000455322 GOLGA3Q08378 1498 aa11.33□□□□□ -0.6
CLASP1-208ENST00000455322 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLASP1-208ENST00000455322 SCAF1Q9H7N4 1312 aaKnown RBP11.33□□□□□ -0.6
CLASP1-208ENST00000455322 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLASP1-208ENST00000455322 CEP162Q5TB80 1403 aa11.32□□□□□ -0.6
CLASP1-208ENST00000455322 TSPY4P0CV99 314 aa11.32□□□□□ -0.6
CLASP1-208ENST00000455322 TSPY10P0CW01 314 aa11.32□□□□□ -0.6
CLASP1-208ENST00000455322 PLPPR3Q6T4P5 718 aa11.32□□□□□ -0.6
CLASP1-208ENST00000455322 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
CLASP1-208ENST00000455322 RB1CC1Q8TDY2 1594 aa11.31□□□□□ -0.6
CLASP1-208ENST00000455322 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.31□□□□□ -0.6
CLASP1-208ENST00000455322 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
CLASP1-208ENST00000455322 ANP32BQ92688 251 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms