RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 DCAF8L2P0C7V8 631 aa17.62■□□□□ 0.41
GPATCH8-205ENST00000587228 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
GPATCH8-205ENST00000587228 SUPT5HO00267 1087 aaKnown RBP16.49■□□□□ 0.23
GPATCH8-205ENST00000587228 SHROOM4Q9ULL8 1493 aa16.33■□□□□ 0.2
GPATCH8-205ENST00000587228 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
GPATCH8-205ENST00000587228 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
GPATCH8-205ENST00000587228 APLP2Q06481 763 aa15.45■□□□□ 0.06
GPATCH8-205ENST00000587228 TTBK1Q5TCY1 1321 aaPredicted RBP15.36■□□□□ 0.05
GPATCH8-205ENST00000587228 RANGAP1P46060 587 aaPredicted RBP15.34■□□□□ 0.05
GPATCH8-205ENST00000587228 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
GPATCH8-205ENST00000587228 ATP1B4Q9UN42 357 aaPredicted RBP15.15■□□□□ 0.02
GPATCH8-205ENST00000587228 UBTFP17480 764 aaKnown RBP15.06■□□□□ 0
GPATCH8-205ENST00000587228 PCGF6Q9BYE7 350 aa15.05■□□□□ 0
GPATCH8-205ENST00000587228 ABCC9O60706 1549 aa14.83□□□□□ -0.04
GPATCH8-205ENST00000587228 PPARGC1BQ86YN6 1023 aaKnown RBP14.81□□□□□ -0.04
GPATCH8-205ENST00000587228 CCER1Q8TC90 406 aaPredicted RBP14.79□□□□□ -0.04
GPATCH8-205ENST00000587228 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.04
GPATCH8-205ENST00000587228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
GPATCH8-205ENST00000587228 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
GPATCH8-205ENST00000587228 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
GPATCH8-205ENST00000587228 MYT1LQ9UL68 1186 aa14.59□□□□□ -0.07
GPATCH8-205ENST00000587228 LOC105371045A0A1W2PR82 267 aa14.59□□□□□ -0.07
GPATCH8-205ENST00000587228 ITGAEP38570 1179 aa14.59□□□□□ -0.07
GPATCH8-205ENST00000587228 ZEB1P37275 1124 aaPredicted RBP14.54□□□□□ -0.08
GPATCH8-205ENST00000587228 CHIC1Q5VXU3 224 aa14.54□□□□□ -0.08
GPATCH8-205ENST00000587228 CENPBP07199 599 aaPredicted RBP14.38□□□□□ -0.11
GPATCH8-205ENST00000587228 TRIM26Q12899 539 aaPredicted RBP14.38□□□□□ -0.11
GPATCH8-205ENST00000587228 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
GPATCH8-205ENST00000587228 POLR3GLQ9BT43 218 aa14.33□□□□□ -0.12
GPATCH8-205ENST00000587228 FBLN2P98095 1184 aa14.3□□□□□ -0.12
GPATCH8-205ENST00000587228 CNGB1Q14028 1251 aaPredicted RBP14.25□□□□□ -0.13
GPATCH8-205ENST00000587228 FAM50AQ14320 339 aaKnown RBP14.19□□□□□ -0.14
GPATCH8-205ENST00000587228 NEFLP07196 543 aa14.18□□□□□ -0.14
GPATCH8-205ENST00000587228 ERICH6Q7L0X2 663 aa14.1□□□□□ -0.15
GPATCH8-205ENST00000587228 HRCP23327 699 aa14.1□□□□□ -0.15
GPATCH8-205ENST00000587228 ARID3CA6NKF2 412 aa14.09□□□□□ -0.15
GPATCH8-205ENST00000587228 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
GPATCH8-205ENST00000587228 P3H3Q8IVL6 736 aa14.09□□□□□ -0.15
GPATCH8-205ENST00000587228 TRIM52Q96A61 297 aa14.09□□□□□ -0.15
GPATCH8-205ENST00000587228 SCRIBQ14160 1630 aa14.06□□□□□ -0.16
GPATCH8-205ENST00000587228 NEUROD1Q13562 356 aa13.99□□□□□ -0.17
GPATCH8-205ENST00000587228 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
GPATCH8-205ENST00000587228 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
GPATCH8-205ENST00000587228 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
GPATCH8-205ENST00000587228 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
GPATCH8-205ENST00000587228 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
GPATCH8-205ENST00000587228 BCANQ96GW7 911 aa13.78□□□□□ -0.2
GPATCH8-205ENST00000587228 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
GPATCH8-205ENST00000587228 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
GPATCH8-205ENST00000587228 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
GPATCH8-205ENST00000587228 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
GPATCH8-205ENST00000587228 DAXXQ9UER7 740 aaPredicted RBP13.7□□□□□ -0.22
GPATCH8-205ENST00000587228 ESF1Q9H501 851 aaKnown RBP13.68□□□□□ -0.22
GPATCH8-205ENST00000587228 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
GPATCH8-205ENST00000587228 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
GPATCH8-205ENST00000587228 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
GPATCH8-205ENST00000587228 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
GPATCH8-205ENST00000587228 ANP32CO43423 234 aa13.62□□□□□ -0.23
GPATCH8-205ENST00000587228 CHIC2Q9UKJ5 165 aa13.61□□□□□ -0.23
GPATCH8-205ENST00000587228 SLC24A1O60721 1099 aa13.6□□□□□ -0.23
GPATCH8-205ENST00000587228 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.23
GPATCH8-205ENST00000587228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■■□□ 14.8
GPATCH8-205ENST00000587228 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
GPATCH8-205ENST00000587228 MYT1Q01538 1121 aa13.52□□□□□ -0.24
GPATCH8-205ENST00000587228 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
GPATCH8-205ENST00000587228 BCL11AQ9H165 835 aa13.51□□□□□ -0.25
GPATCH8-205ENST00000587228 KCNH8Q96L42 1107 aa13.5□□□□□ -0.25
GPATCH8-205ENST00000587228 TSPY4P0CV99 314 aa13.5□□□□□ -0.25
GPATCH8-205ENST00000587228 TSPY10P0CW01 314 aa13.5□□□□□ -0.25
GPATCH8-205ENST00000587228 MTUS2Q5JR59 1369 aa13.49□□□□□ -0.25
GPATCH8-205ENST00000587228 NACADO15069 1562 aa13.48□□□□□ -0.25
GPATCH8-205ENST00000587228 NEFMP07197 916 aa13.47□□□□□ -0.25
GPATCH8-205ENST00000587228 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
GPATCH8-205ENST00000587228 TONSLQ96HA7 1378 aa13.47□□□□□ -0.25
GPATCH8-205ENST00000587228 SENP3Q9H4L4 574 aaPredicted RBP13.43□□□□□ -0.26
GPATCH8-205ENST00000587228 CLIP1P30622 1438 aa13.42□□□□□ -0.26
GPATCH8-205ENST00000587228 CANXP27824 592 aaKnown RBP13.42□□□□□ -0.26
GPATCH8-205ENST00000587228 KDM2AQ9Y2K7 1162 aa13.41□□□□□ -0.26
GPATCH8-205ENST00000587228 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
GPATCH8-205ENST00000587228 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
GPATCH8-205ENST00000587228 PLEKHD1A6NEE1 506 aa13.39□□□□□ -0.27
GPATCH8-205ENST00000587228 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
GPATCH8-205ENST00000587228 ERCC6Q03468 1493 aa13.37□□□□□ -0.27
GPATCH8-205ENST00000587228 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
GPATCH8-205ENST00000587228 DDX10Q13206 875 aaKnown RBP13.35□□□□□ -0.27
GPATCH8-205ENST00000587228 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
GPATCH8-205ENST00000587228 DCAF1Q9Y4B6 1507 aa13.33□□□□□ -0.28
GPATCH8-205ENST00000587228 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
GPATCH8-205ENST00000587228 KIF27Q86VH2 1401 aa13.31□□□□□ -0.28
GPATCH8-205ENST00000587228 HIRIP3Q9BW71 556 aaPredicted RBP13.3□□□□□ -0.28
GPATCH8-205ENST00000587228 FAM9BQ8IZU0 186 aa13.28□□□□□ -0.28
GPATCH8-205ENST00000587228 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
GPATCH8-205ENST00000587228 CFDP1Q9UEE9 299 aaPredicted RBP13.28□□□□□ -0.28
GPATCH8-205ENST00000587228 ARID4BQ4LE39 1312 aaPredicted RBP13.27□□□□□ -0.29
GPATCH8-205ENST00000587228 GOLGA3Q08378 1498 aa13.27□□□□□ -0.29
GPATCH8-205ENST00000587228 BAZ1AQ9NRL2 1556 aaPredicted RBP13.27□□□□□ -0.29
GPATCH8-205ENST00000587228 RGL3Q3MIN7 710 aa13.27□□□□□ -0.29
GPATCH8-205ENST00000587228 CEP162Q5TB80 1403 aa13.26□□□□□ -0.29
GPATCH8-205ENST00000587228 EEA1Q15075 1411 aa13.26□□□□□ -0.29
GPATCH8-205ENST00000587228 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms