RNA–Protein interactions for RNA: ENST00000452274.6

CLASP1-207, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5

Gene CLASP1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-207ENST00000452274 NISCHQ9Y2I1 1504 aa17.11■□□□□ 0.33
CLASP1-207ENST00000452274 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
CLASP1-207ENST00000452274 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.08
CLASP1-207ENST00000452274 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
CLASP1-207ENST00000452274 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
CLASP1-207ENST00000452274 ABCC9O60706 1549 aa14.54□□□□□ -0.08
CLASP1-207ENST00000452274 FAM9AQ8IZU1 332 aaPredicted RBP14.44□□□□□ -0.1
CLASP1-207ENST00000452274 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
CLASP1-207ENST00000452274 CCDC180Q9P1Z9 1646 aa14.25□□□□□ -0.13
CLASP1-207ENST00000452274 ZCCHC6Q5VYS8 1495 aaKnown RBP14.23□□□□□ -0.13
CLASP1-207ENST00000452274 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLASP1-207ENST00000452274 CHIC1Q5VXU3 224 aa14.13□□□□□ -0.15
CLASP1-207ENST00000452274 RANGAP1P46060 587 aaPredicted RBP14.03□□□□□ -0.16
CLASP1-207ENST00000452274 TTBK1Q5TCY1 1321 aaPredicted RBP14.02□□□□□ -0.17
CLASP1-207ENST00000452274 PCGF6Q9BYE7 350 aa14.01□□□□□ -0.17
CLASP1-207ENST00000452274 APLP2Q06481 763 aa13.99□□□□□ -0.17
CLASP1-207ENST00000452274 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
CLASP1-207ENST00000452274 SCRIBQ14160 1630 aa13.95□□□□□ -0.18
CLASP1-207ENST00000452274 LOC105371045A0A1W2PR82 267 aa13.95□□□□□ -0.18
CLASP1-207ENST00000452274 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
CLASP1-207ENST00000452274 ATP1B4Q9UN42 357 aaPredicted RBP13.75□□□□□ -0.21
CLASP1-207ENST00000452274 RB1CC1Q8TDY2 1594 aa13.7□□□□□ -0.22
CLASP1-207ENST00000452274 NACADO15069 1562 aa13.68□□□□□ -0.22
CLASP1-207ENST00000452274 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
CLASP1-207ENST00000452274 RSF1Q96T23 1441 aaPredicted RBP13.59□□□□□ -0.23
CLASP1-207ENST00000452274 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
CLASP1-207ENST00000452274 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.24
CLASP1-207ENST00000452274 CECR2Q9BXF3 1484 aa13.49□□□□□ -0.25
CLASP1-207ENST00000452274 ZEB1P37275 1124 aaPredicted RBP13.46□□□□□ -0.26
CLASP1-207ENST00000452274 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
CLASP1-207ENST00000452274 ITGAEP38570 1179 aa13.39□□□□□ -0.27
CLASP1-207ENST00000452274 HNRNPUL2Q1KMD3 747 aaKnown RBP13.38□□□□□ -0.27
CLASP1-207ENST00000452274 MYO15BQ96JP2 1530 aa13.35□□□□□ -0.27
CLASP1-207ENST00000452274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.35□□□□□ -0.27
CLASP1-207ENST00000452274 HRCP23327 699 aa13.34□□□□□ -0.27
CLASP1-207ENST00000452274 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
CLASP1-207ENST00000452274 MROH2BQ7Z745 1585 aa13.3□□□□□ -0.28
CLASP1-207ENST00000452274 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
CLASP1-207ENST00000452274 FBLN2P98095 1184 aa13.22□□□□□ -0.29
CLASP1-207ENST00000452274 P3H3Q8IVL6 736 aa13.22□□□□□ -0.29
CLASP1-207ENST00000452274 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
CLASP1-207ENST00000452274 FAM50AQ14320 339 aaKnown RBP13.14□□□□□ -0.31
CLASP1-207ENST00000452274 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
CLASP1-207ENST00000452274 WIZO95785 1651 aa13.1□□□□□ -0.31
CLASP1-207ENST00000452274 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
CLASP1-207ENST00000452274 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
CLASP1-207ENST00000452274 EEA1Q15075 1411 aa13.01□□□□□ -0.33
CLASP1-207ENST00000452274 SMARCA2P51531 1590 aa13□□□□□ -0.33
CLASP1-207ENST00000452274 ATAD2BQ9ULI0 1458 aa12.98□□□□□ -0.33
CLASP1-207ENST00000452274 SOGA1O94964 1423 aa12.97□□□□□ -0.33
CLASP1-207ENST00000452274 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
CLASP1-207ENST00000452274 CENPBP07199 599 aaPredicted RBP12.97□□□□□ -0.33
CLASP1-207ENST00000452274 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
CLASP1-207ENST00000452274 SMARCA4P51532 1647 aa12.97□□□□□ -0.33
CLASP1-207ENST00000452274 CLIP1P30622 1438 aa12.97□□□□□ -0.33
CLASP1-207ENST00000452274 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
CLASP1-207ENST00000452274 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
CLASP1-207ENST00000452274 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
CLASP1-207ENST00000452274 GOLGA3Q08378 1498 aa12.94□□□□□ -0.34
CLASP1-207ENST00000452274 KIF27Q86VH2 1401 aa12.93□□□□□ -0.34
CLASP1-207ENST00000452274 TRIM52Q96A61 297 aa12.93□□□□□ -0.34
CLASP1-207ENST00000452274 NEUROD1Q13562 356 aa12.9□□□□□ -0.34
CLASP1-207ENST00000452274 TNIKQ9UKE5 1360 aa12.9□□□□□ -0.34
CLASP1-207ENST00000452274 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
CLASP1-207ENST00000452274 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
CLASP1-207ENST00000452274 POLR3GLQ9BT43 218 aa12.85□□□□□ -0.35
CLASP1-207ENST00000452274 CDK11AQ9UQ88 783 aaPredicted RBP12.84□□□□□ -0.35
CLASP1-207ENST00000452274 ZNF777Q9ULD5 760 aaPredicted RBP12.84□□□□□ -0.35
CLASP1-207ENST00000452274 CUX2O14529 1486 aa12.83□□□□□ -0.36
CLASP1-207ENST00000452274 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
CLASP1-207ENST00000452274 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
CLASP1-207ENST00000452274 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
CLASP1-207ENST00000452274 CARMIL1Q5VZK9 1371 aa12.78□□□□□ -0.36
CLASP1-207ENST00000452274 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
CLASP1-207ENST00000452274 CNGB1Q14028 1251 aaPredicted RBP12.78□□□□□ -0.36
CLASP1-207ENST00000452274 MTUS2Q5JR59 1369 aa12.76□□□□□ -0.37
CLASP1-207ENST00000452274 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
CLASP1-207ENST00000452274 TDRD9Q8NDG6 1382 aaKnown RBP12.74□□□□□ -0.37
CLASP1-207ENST00000452274 CHIC2Q9UKJ5 165 aa12.73□□□□□ -0.37
CLASP1-207ENST00000452274 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
CLASP1-207ENST00000452274 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
CLASP1-207ENST00000452274 NCAPD3P42695 1498 aa12.71□□□□□ -0.37
CLASP1-207ENST00000452274 ZNF326Q5BKZ1 582 aaKnown RBP12.7□□□□□ -0.38
CLASP1-207ENST00000452274 ZNF316A6NFI3 1004 aaPredicted RBP12.7□□□□□ -0.38
CLASP1-207ENST00000452274 BICRAQ9NZM4 1560 aa12.67□□□□□ -0.38
CLASP1-207ENST00000452274 FANCD2Q9BXW9 1451 aa12.64□□□□□ -0.39
CLASP1-207ENST00000452274 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLASP1-207ENST00000452274 NEFLP07196 543 aa12.62□□□□□ -0.39
CLASP1-207ENST00000452274 RAPGEF2Q9Y4G8 1499 aa12.62□□□□□ -0.39
CLASP1-207ENST00000452274 VPS8Q8N3P4 1428 aa12.61□□□□□ -0.39
CLASP1-207ENST00000452274 RRP7BPQ9NSQ0 103 aa12.6□□□□□ -0.39
CLASP1-207ENST00000452274 PLEKHD1A6NEE1 506 aa12.59□□□□□ -0.39
CLASP1-207ENST00000452274 KANK4Q5T7N3 995 aaPredicted RBP12.59□□□□□ -0.39
CLASP1-207ENST00000452274 KCNH8Q96L42 1107 aa12.58□□□□□ -0.4
CLASP1-207ENST00000452274 TSPY4P0CV99 314 aa12.58□□□□□ -0.4
CLASP1-207ENST00000452274 TSPY10P0CW01 314 aa12.58□□□□□ -0.4
CLASP1-207ENST00000452274 FHAD1B1AJZ9 1412 aa12.57□□□□□ -0.4
CLASP1-207ENST00000452274 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
CLASP1-207ENST00000452274 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
CLASP1-207ENST00000452274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.43e-7■■□□□ 12.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms