RNA–Protein interactions for RNA: ENST00000473078.1

CDK6-204, Transcript of cyclin dependent kinase 6, humanhuman

TSL 2

Gene CDK6, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK6-204ENST00000473078 AEBP2Q6ZN18 517 aaPredicted RBP11.35□□□□□ -0.59
CDK6-204ENST00000473078 CHIC1Q5VXU3 224 aa10.56□□□□□ -0.72
CDK6-204ENST00000473078 SENP3Q9H4L4 574 aaPredicted RBP9.72□□□□□ -0.85
CDK6-204ENST00000473078 PHF23Q9BUL5 403 aaPredicted RBP9.53□□□□□ -0.88
CDK6-204ENST00000473078 POTEDQ86YR6 584 aa9.23□□□□□ -0.93
CDK6-204ENST00000473078 FOXD1Q16676 465 aa9.12□□□□□ -0.95
CDK6-204ENST00000473078 MSH5O43196 834 aa8.69□□□□□ -1.02
CDK6-204ENST00000473078 PIAS4Q8N2W9 510 aaPredicted RBP8.42□□□□□ -1.06
CDK6-204ENST00000473078 PPP6R1Q9UPN7 881 aa8.21□□□□□ -1.1
CDK6-204ENST00000473078 ADRA2BP18089 450 aa8.14□□□□□ -1.11
CDK6-204ENST00000473078 PLPPR3Q6T4P5 718 aa8.05□□□□□ -1.12
CDK6-204ENST00000473078 CACNB1Q02641 598 aaPredicted RBP7.72□□□□□ -1.17
CDK6-204ENST00000473078 DMRT2Q9Y5R5 561 aa7.65□□□□□ -1.18
CDK6-204ENST00000473078 MAPK8IP2Q13387 824 aaPredicted RBP7.61□□□□□ -1.19
CDK6-204ENST00000473078 SCAF1Q9H7N4 1312 aaKnown RBP7.42□□□□□ -1.22
CDK6-204ENST00000473078 RNF39Q9H2S5 420 aa7.38□□□□□ -1.23
CDK6-204ENST00000473078 DCAF8L1A6NGE4 600 aa7.34□□□□□ -1.23
CDK6-204ENST00000473078 C1QBPQ07021 282 aaKnown RBP7.24□□□□□ -1.25
CDK6-204ENST00000473078 HOXD11P31277 338 aaPredicted RBP7.2□□□□□ -1.26
CDK6-204ENST00000473078 POTEHQ6S545 545 aa7.14□□□□□ -1.27
CDK6-204ENST00000473078 RNF216Q9NWF9 866 aaPredicted RBP7.02□□□□□ -1.29
CDK6-204ENST00000473078 DNAJC5BQ9UF47 199 aa7.02□□□□□ -1.29
CDK6-204ENST00000473078 PPP4R3CPQ6ZMV5 832 aa7.01□□□□□ -1.29
CDK6-204ENST00000473078 CNKSR2Q8WXI2 1034 aa6.97□□□□□ -1.29
CDK6-204ENST00000473078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.84□□□□□ -1.313e-15■■□□□ 11.4
CDK6-204ENST00000473078 DSG3P32926 999 aa6.78□□□□□ -1.32
CDK6-204ENST00000473078 SPINK5Q9NQ38 1064 aaPredicted RBP6.7□□□□□ -1.34
CDK6-204ENST00000473078 CAPN15O75808 1086 aa6.69□□□□□ -1.34
CDK6-204ENST00000473078 U3KPZ7 1027 aaPredicted RBP6.67□□□□□ -1.34
CDK6-204ENST00000473078 NCBP3Q53F19 620 aaKnown RBP6.58□□□□□ -1.36
CDK6-204ENST00000473078 ABCB7O75027 752 aa6.52□□□□□ -1.37
CDK6-204ENST00000473078 NPM3O75607 178 aaKnown RBP6.52□□□□□ -1.37
CDK6-204ENST00000473078 CHRDL2Q6WN34 429 aa6.5□□□□□ -1.37
CDK6-204ENST00000473078 SP7Q8TDD2 431 aaPredicted RBP6.5□□□□□ -1.37
CDK6-204ENST00000473078 TRHP20396 242 aaPredicted RBP6.49□□□□□ -1.37
CDK6-204ENST00000473078 RBM42Q9BTD8 480 aaKnown RBP6.46□□□□□ -1.38
CDK6-204ENST00000473078 ZNF219Q9P2Y4 722 aaPredicted RBP6.46□□□□□ -1.38
CDK6-204ENST00000473078 APLP2Q06481 763 aa6.4□□□□□ -1.38
CDK6-204ENST00000473078 SLC4A2P04920 1241 aa6.35□□□□□ -1.39
CDK6-204ENST00000473078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.3□□□□□ -1.4
CDK6-204ENST00000473078 HNRNPUL2Q1KMD3 747 aaKnown RBP6.3□□□□□ -1.4
CDK6-204ENST00000473078 PIP4P2Q8N4L2 257 aa6.26□□□□□ -1.41
CDK6-204ENST00000473078 SAMD1Q6SPF0 538 aaPredicted RBP6.25□□□□□ -1.41
CDK6-204ENST00000473078 HAX1O00165 279 aa6.24□□□□□ -1.41
CDK6-204ENST00000473078 AKT1S1Q96B36 256 aa6.22□□□□□ -1.41
CDK6-204ENST00000473078 POLA2Q14181 598 aa6.21□□□□□ -1.42
CDK6-204ENST00000473078 REM2Q8IYK8 340 aaPredicted RBP6.17□□□□□ -1.42
CDK6-204ENST00000473078 EVX2Q03828 476 aa6.16□□□□□ -1.42
CDK6-204ENST00000473078 FXR2P51116 673 aaKnown RBP eCLIP6.15□□□□□ -1.42
CDK6-204ENST00000473078 DNAJC5Q9H3Z4 198 aa6.14□□□□□ -1.43
CDK6-204ENST00000473078 PITPNM1O00562 1244 aa6.12□□□□□ -1.43
CDK6-204ENST00000473078 KCNA4P22459 653 aa6.12□□□□□ -1.43
CDK6-204ENST00000473078 LHX8Q68G74 356 aa6.08□□□□□ -1.44
CDK6-204ENST00000473078 OSCARQ8IYS5 282 aa6.06□□□□□ -1.44
CDK6-204ENST00000473078 PLSCR2Q9NRY7 297 aa6.05□□□□□ -1.44
CDK6-204ENST00000473078 MYCNP04198 464 aaPredicted RBP6.04□□□□□ -1.44
CDK6-204ENST00000473078 ZBTB12Q9Y330 459 aaPredicted RBP6.04□□□□□ -1.44
CDK6-204ENST00000473078 GABBR2O75899 941 aa5.98□□□□□ -1.45
CDK6-204ENST00000473078 C19orf67A6NJJ6 358 aa5.96□□□□□ -1.46
CDK6-204ENST00000473078 PRKAR2AP13861 404 aaKnown RBP5.95□□□□□ -1.46
CDK6-204ENST00000473078 ATF5Q9Y2D1 282 aaPredicted RBP5.95□□□□□ -1.46
CDK6-204ENST00000473078 SLC4A1APQ9BWU0 796 aaKnown RBP5.88□□□□□ -1.47
CDK6-204ENST00000473078 POTEIP0CG38 1075 aa5.86□□□□□ -1.47
CDK6-204ENST00000473078 CLEC11AQ9Y240 323 aa5.85□□□□□ -1.47
CDK6-204ENST00000473078 SPDYE2BA6NHP3 402 aa5.83□□□□□ -1.48
CDK6-204ENST00000473078 SPDYE6P0CI01 402 aa5.83□□□□□ -1.48
CDK6-204ENST00000473078 SPDYE2Q495Y8 402 aa5.83□□□□□ -1.48
CDK6-204ENST00000473078 SPDYE1Q8NFV5 336 aaPredicted RBP5.83□□□□□ -1.48
CDK6-204ENST00000473078 CHADLQ6NUI6 762 aa5.8□□□□□ -1.48
CDK6-204ENST00000473078 FOXD4L1Q9NU39 408 aa5.77□□□□□ -1.49
CDK6-204ENST00000473078 POTEMA6NI47 508 aa5.76□□□□□ -1.49
CDK6-204ENST00000473078 CD44P16070 742 aaKnown RBP5.73□□□□□ -1.49
CDK6-204ENST00000473078 POTEGQ6S5H5 508 aa5.72□□□□□ -1.49
CDK6-204ENST00000473078 OTUD5Q96G74 571 aa5.72□□□□□ -1.49
CDK6-204ENST00000473078 DCBLD2Q96PD2 775 aa5.72□□□□□ -1.49
CDK6-204ENST00000473078 SSUH2Q9Y2M2 353 aa5.72□□□□□ -1.49
CDK6-204ENST00000473078 CLCN6P51797 869 aa5.71□□□□□ -1.5
CDK6-204ENST00000473078 FBLN2P98095 1184 aa5.71□□□□□ -1.5
CDK6-204ENST00000473078 ZNF692Q9BU19 519 aaPredicted RBP5.69□□□□□ -1.5
CDK6-204ENST00000473078 PRR29P0C7W0 189 aa5.68□□□□□ -1.5
CDK6-204ENST00000473078 POTEB2H3BUK9 544 aa5.67□□□□□ -1.5
CDK6-204ENST00000473078 PCDH10Q9P2E7 1040 aa5.66□□□□□ -1.5
CDK6-204ENST00000473078 MKRN4PQ13434 485 aaPredicted RBP5.65□□□□□ -1.5
CDK6-204ENST00000473078 FARP1Q9Y4F1 1045 aaPredicted RBP5.65□□□□□ -1.5
CDK6-204ENST00000473078 ZNF579Q8NAF0 562 aaKnown RBP5.63□□□□□ -1.51
CDK6-204ENST00000473078 ATXN8OSP0DMR3 200 aa5.62□□□□□ -1.51
CDK6-204ENST00000473078 GALR2O43603 387 aaPredicted RBP5.6□□□□□ -1.51
CDK6-204ENST00000473078 PABPN1Q86U42 306 aaKnown RBP eCLIP5.6□□□□□ -1.51
CDK6-204ENST00000473078 ZRANB1Q9UGI0 708 aa5.58□□□□□ -1.52
CDK6-204ENST00000473078 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
CDK6-204ENST00000473078 ZBTB22O15209 634 aa5.56□□□□□ -1.52
CDK6-204ENST00000473078 PELP1Q8IZL8 1130 aaKnown RBP5.53□□□□□ -1.52
CDK6-204ENST00000473078 EHMT2Q96KQ7 1210 aa5.52□□□□□ -1.53
CDK6-204ENST00000473078 POTEJP0CG39 1038 aa5.51□□□□□ -1.53
CDK6-204ENST00000473078 ILDR1Q86SU0 546 aaPredicted RBP5.49□□□□□ -1.53
CDK6-204ENST00000473078 FAM163AQ96GL9 167 aaPredicted RBP5.49□□□□□ -1.53
CDK6-204ENST00000473078 METRNQ9UJH8 293 aa5.49□□□□□ -1.53
CDK6-204ENST00000473078 CSRNP3Q8WYN3 585 aa5.48□□□□□ -1.53
CDK6-204ENST00000473078 PHF12Q96QT6 1004 aa5.48□□□□□ -1.53
CDK6-204ENST00000473078 MAMSTRQ6ZN01 415 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms