RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 AEBP2Q6ZN18 517 aaPredicted RBP14.91□□□□□ -0.02
RPRD1A-204ENST00000585953 CHIC1Q5VXU3 224 aa14.02□□□□□ -0.16
RPRD1A-204ENST00000585953 SENP3Q9H4L4 574 aaPredicted RBP12.87□□□□□ -0.35
RPRD1A-204ENST00000585953 PHF23Q9BUL5 403 aaPredicted RBP12.6□□□□□ -0.39
RPRD1A-204ENST00000585953 FOXD1Q16676 465 aa11.98□□□□□ -0.49
RPRD1A-204ENST00000585953 POTEDQ86YR6 584 aa11.75□□□□□ -0.53
RPRD1A-204ENST00000585953 MSH5O43196 834 aa11.43□□□□□ -0.58
RPRD1A-204ENST00000585953 PIAS4Q8N2W9 510 aaPredicted RBP11.11□□□□□ -0.63
RPRD1A-204ENST00000585953 PLPPR3Q6T4P5 718 aa10.91□□□□□ -0.66
RPRD1A-204ENST00000585953 PPP6R1Q9UPN7 881 aa10.87□□□□□ -0.67
RPRD1A-204ENST00000585953 ADRA2BP18089 450 aa10.81□□□□□ -0.68
RPRD1A-204ENST00000585953 DMRT2Q9Y5R5 561 aa10.13□□□□□ -0.79
RPRD1A-204ENST00000585953 MAPK8IP2Q13387 824 aaPredicted RBP10.03□□□□□ -0.8
RPRD1A-204ENST00000585953 SCAF1Q9H7N4 1312 aaKnown RBP10.02□□□□□ -0.81
RPRD1A-204ENST00000585953 CACNB1Q02641 598 aaPredicted RBP10□□□□□ -0.81
RPRD1A-204ENST00000585953 RNF39Q9H2S5 420 aa9.69□□□□□ -0.86
RPRD1A-204ENST00000585953 DCAF8L1A6NGE4 600 aa9.67□□□□□ -0.86
RPRD1A-204ENST00000585953 HOXD11P31277 338 aaPredicted RBP9.61□□□□□ -0.87
RPRD1A-204ENST00000585953 C1QBPQ07021 282 aaKnown RBP9.57□□□□□ -0.88
RPRD1A-204ENST00000585953 PPP4R3CPQ6ZMV5 832 aa9.48□□□□□ -0.89
RPRD1A-204ENST00000585953 RNF216Q9NWF9 866 aaPredicted RBP9.44□□□□□ -0.9
RPRD1A-204ENST00000585953 DNAJC5BQ9UF47 199 aa9.44□□□□□ -0.9
RPRD1A-204ENST00000585953 CNKSR2Q8WXI2 1034 aa9.43□□□□□ -0.9
RPRD1A-204ENST00000585953 POTEHQ6S545 545 aa9.15□□□□□ -0.95
RPRD1A-204ENST00000585953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.14□□□□□ -0.95
RPRD1A-204ENST00000585953 NCBP3Q53F19 620 aaKnown RBP9.06□□□□□ -0.96
RPRD1A-204ENST00000585953 DSG3P32926 999 aa8.92□□□□□ -0.98
RPRD1A-204ENST00000585953 KCNA4P22459 653 aa8.89□□□□□ -0.99
RPRD1A-204ENST00000585953 U3KPZ7 1027 aaPredicted RBP8.88□□□□□ -0.99
RPRD1A-204ENST00000585953 CAPN15O75808 1086 aa8.87□□□□□ -0.99
RPRD1A-204ENST00000585953 NPM3O75607 178 aaKnown RBP8.85□□□□□ -0.99
RPRD1A-204ENST00000585953 SPINK5Q9NQ38 1064 aaPredicted RBP8.84□□□□□ -0.99
RPRD1A-204ENST00000585953 APLP2Q06481 763 aa8.71□□□□□ -1.01
RPRD1A-204ENST00000585953 ZNF219Q9P2Y4 722 aaPredicted RBP8.66□□□□□ -1.02
RPRD1A-204ENST00000585953 TRHP20396 242 aaPredicted RBP8.62□□□□□ -1.03
RPRD1A-204ENST00000585953 RBM42Q9BTD8 480 aaKnown RBP8.6□□□□□ -1.03
RPRD1A-204ENST00000585953 ABCB7O75027 752 aa8.59□□□□□ -1.03
RPRD1A-204ENST00000585953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.59□□□□□ -1.03
RPRD1A-204ENST00000585953 HNRNPUL2Q1KMD3 747 aaKnown RBP8.59□□□□□ -1.03
RPRD1A-204ENST00000585953 SLC4A2P04920 1241 aa8.54□□□□□ -1.04
RPRD1A-204ENST00000585953 CHRDL2Q6WN34 429 aa8.5□□□□□ -1.05
RPRD1A-204ENST00000585953 SAMD1Q6SPF0 538 aaPredicted RBP8.5□□□□□ -1.05
RPRD1A-204ENST00000585953 SLC4A1APQ9BWU0 796 aaKnown RBP8.47□□□□□ -1.05
RPRD1A-204ENST00000585953 SP7Q8TDD2 431 aaPredicted RBP8.4□□□□□ -1.06
RPRD1A-204ENST00000585953 EHMT2Q96KQ7 1210 aa8.34□□□□□ -1.07
RPRD1A-204ENST00000585953 POLA2Q14181 598 aa8.32□□□□□ -1.08
RPRD1A-204ENST00000585953 AKT1S1Q96B36 256 aa8.29□□□□□ -1.08
RPRD1A-204ENST00000585953 MYCNP04198 464 aaPredicted RBP8.25□□□□□ -1.09
RPRD1A-204ENST00000585953 ZBTB12Q9Y330 459 aaPredicted RBP8.21□□□□□ -1.09
RPRD1A-204ENST00000585953 CSRNP3Q8WYN3 585 aa8.2□□□□□ -1.1
RPRD1A-204ENST00000585953 PIP4P2Q8N4L2 257 aa8.2□□□□□ -1.1
RPRD1A-204ENST00000585953 ZBTB22O15209 634 aa8.19□□□□□ -1.1
RPRD1A-204ENST00000585953 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
RPRD1A-204ENST00000585953 HAX1O00165 279 aa8.17□□□□□ -1.1
RPRD1A-204ENST00000585953 FOXD4L1Q9NU39 408 aa8.15□□□□□ -1.1
RPRD1A-204ENST00000585953 FXR2P51116 673 aaKnown RBP eCLIP8.12□□□□□ -1.11
RPRD1A-204ENST00000585953 PITPNM1O00562 1244 aa8.08□□□□□ -1.12
RPRD1A-204ENST00000585953 OSCARQ8IYS5 282 aa8.05□□□□□ -1.12
RPRD1A-204ENST00000585953 ATF5Q9Y2D1 282 aaPredicted RBP7.99□□□□□ -1.13
RPRD1A-204ENST00000585953 EVX2Q03828 476 aa7.97□□□□□ -1.13
RPRD1A-204ENST00000585953 SPDYE2BA6NHP3 402 aa7.9□□□□□ -1.15
RPRD1A-204ENST00000585953 SPDYE6P0CI01 402 aa7.9□□□□□ -1.15
RPRD1A-204ENST00000585953 SPDYE2Q495Y8 402 aa7.9□□□□□ -1.15
RPRD1A-204ENST00000585953 C19orf67A6NJJ6 358 aa7.87□□□□□ -1.15
RPRD1A-204ENST00000585953 PRKAR2AP13861 404 aaKnown RBP7.87□□□□□ -1.15
RPRD1A-204ENST00000585953 LHX8Q68G74 356 aa7.87□□□□□ -1.15
RPRD1A-204ENST00000585953 ATXN8OSP0DMR3 200 aa7.85□□□□□ -1.15
RPRD1A-204ENST00000585953 SPDYE1Q8NFV5 336 aaPredicted RBP7.85□□□□□ -1.15
RPRD1A-204ENST00000585953 GABBR2O75899 941 aa7.83□□□□□ -1.16
RPRD1A-204ENST00000585953 FBLN2P98095 1184 aa7.81□□□□□ -1.16
RPRD1A-204ENST00000585953 CLEC11AQ9Y240 323 aa7.79□□□□□ -1.16
RPRD1A-204ENST00000585953 SSUH2Q9Y2M2 353 aa7.73□□□□□ -1.17
RPRD1A-204ENST00000585953 CLCN6P51797 869 aa7.7□□□□□ -1.18
RPRD1A-204ENST00000585953 ZNF692Q9BU19 519 aaPredicted RBP7.7□□□□□ -1.18
RPRD1A-204ENST00000585953 CHADLQ6NUI6 762 aa7.66□□□□□ -1.18
RPRD1A-204ENST00000585953 PLSCR2Q9NRY7 297 aa7.64□□□□□ -1.19
RPRD1A-204ENST00000585953 PRR29P0C7W0 189 aa7.64□□□□□ -1.19
RPRD1A-204ENST00000585953 POTEIP0CG38 1075 aa7.63□□□□□ -1.19
RPRD1A-204ENST00000585953 MKRN4PQ13434 485 aaPredicted RBP7.63□□□□□ -1.19
RPRD1A-204ENST00000585953 CD44P16070 742 aaKnown RBP7.6□□□□□ -1.19
RPRD1A-204ENST00000585953 DCBLD2Q96PD2 775 aa7.56□□□□□ -1.2
RPRD1A-204ENST00000585953 FARP1Q9Y4F1 1045 aaPredicted RBP7.56□□□□□ -1.2
RPRD1A-204ENST00000585953 PABPN1Q86U42 306 aaKnown RBP eCLIP7.55□□□□□ -1.2
RPRD1A-204ENST00000585953 ZNF579Q8NAF0 562 aaKnown RBP7.5□□□□□ -1.21
RPRD1A-204ENST00000585953 OTUD5Q96G74 571 aa7.44□□□□□ -1.22
RPRD1A-204ENST00000585953 ZRANB1Q9UGI0 708 aa7.43□□□□□ -1.22
RPRD1A-204ENST00000585953 PCDH10Q9P2E7 1040 aa7.42□□□□□ -1.22
RPRD1A-204ENST00000585953 POTEMA6NI47 508 aa7.41□□□□□ -1.22
RPRD1A-204ENST00000585953 FKBP8Q14318 412 aa7.4□□□□□ -1.22
RPRD1A-204ENST00000585953 POTEGQ6S5H5 508 aa7.38□□□□□ -1.23
RPRD1A-204ENST00000585953 GALR2O43603 387 aaPredicted RBP7.38□□□□□ -1.23
RPRD1A-204ENST00000585953 POTEB2H3BUK9 544 aa7.35□□□□□ -1.23
RPRD1A-204ENST00000585953 STAG3Q9UJ98 1225 aa7.35□□□□□ -1.23
RPRD1A-204ENST00000585953 PAK3O75914 559 aaPredicted RBP7.34□□□□□ -1.23
RPRD1A-204ENST00000585953 CREBZFQ9NS37 354 aa7.34□□□□□ -1.23
RPRD1A-204ENST00000585953 SPDYE4A6NLX3 237 aa7.31□□□□□ -1.24
RPRD1A-204ENST00000585953 MAMSTRQ6ZN01 415 aa7.29□□□□□ -1.24
RPRD1A-204ENST00000585953 PHF12Q96QT6 1004 aa7.26□□□□□ -1.25
RPRD1A-204ENST00000585953 NPM1P06748 294 aaKnown RBP eCLIP7.26□□□□□ -1.25
RPRD1A-204ENST00000585953 C7P10643 843 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms