Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.04■■□□□ 1.92
SLC6A12P48065 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
SLC6A12P48065 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
SLC6A12P48065 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SLC6A12P48065 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SLC6A12P48065 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SLC6A12P48065 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
SLC6A12P48065 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27■■□□□ 1.91
SLC6A12P48065 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SLC6A12P48065 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27■■□□□ 1.91
SLC6A12P48065 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SLC6A12P48065 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
SLC6A12P48065 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.96■■□□□ 1.91
SLC6A12P48065 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SLC6A12P48065 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.92■■□□□ 1.9
SLC6A12P48065 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SLC6A12P48065 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SLC6A12P48065 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
SLC6A12P48065 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
SLC6A12P48065 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLC6A12P48065 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
SLC6A12P48065 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.87■■□□□ 1.89
SLC6A12P48065 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.87■■□□□ 1.89
SLC6A12P48065 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC6A12P48065 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.86■■□□□ 1.89
SLC6A12P48065 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SLC6A12P48065 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SLC6A12P48065 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
SLC6A12P48065 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SLC6A12P48065 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC6A12P48065 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SLC6A12P48065 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC6A12P48065 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC6A12P48065 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SLC6A12P48065 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.82■■□□□ 1.88
SLC6A12P48065 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.81■■□□□ 1.88
SLC6A12P48065 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.8■■□□□ 1.88
SLC6A12P48065 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
SLC6A12P48065 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.79■■□□□ 1.88
SLC6A12P48065 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SLC6A12P48065 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC6A12P48065 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC6A12P48065 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
SLC6A12P48065 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SLC6A12P48065 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.77■■□□□ 1.88
SLC6A12P48065 AC120057.4-201ENST00000624722 1615 ntBASIC26.77■■□□□ 1.88
SLC6A12P48065 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.76■■□□□ 1.87
SLC6A12P48065 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.74■■□□□ 1.87
SLC6A12P48065 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
SLC6A12P48065 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SLC6A12P48065 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SLC6A12P48065 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLC6A12P48065 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.72■■□□□ 1.87
SLC6A12P48065 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.72■■□□□ 1.87
SLC6A12P48065 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.71■■□□□ 1.87
SLC6A12P48065 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SLC6A12P48065 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.7■■□□□ 1.86
SLC6A12P48065 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC6A12P48065 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
SLC6A12P48065 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SLC6A12P48065 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.68■■□□□ 1.86
SLC6A12P48065 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SLC6A12P48065 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC6A12P48065 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC6A12P48065 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.65■■□□□ 1.86
SLC6A12P48065 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.65■■□□□ 1.86
SLC6A12P48065 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.65■■□□□ 1.86
SLC6A12P48065 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLC6A12P48065 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SLC6A12P48065 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
SLC6A12P48065 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SLC6A12P48065 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SLC6A12P48065 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC6A12P48065 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC6A12P48065 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC6A12P48065 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SLC6A12P48065 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.58■■□□□ 1.85
SLC6A12P48065 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SLC6A12P48065 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC6A12P48065 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.55■■□□□ 1.84
SLC6A12P48065 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SLC6A12P48065 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.54■■□□□ 1.84
SLC6A12P48065 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SLC6A12P48065 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SLC6A12P48065 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLC6A12P48065 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLC6A12P48065 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLC6A12P48065 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLC6A12P48065 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SLC6A12P48065 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.49■■□□□ 1.83
SLC6A12P48065 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SLC6A12P48065 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.46■■□□□ 1.83
SLC6A12P48065 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC6A12P48065 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SLC6A12P48065 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SLC6A12P48065 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SLC6A12P48065 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.44■■□□□ 1.82
SLC6A12P48065 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC6A12P48065 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.42■■□□□ 1.82
SLC6A12P48065 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms