Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.71■■■□□ 2.67
CCNT1O60563 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
CCNT1O60563 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCNT1O60563 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.67■■■□□ 2.66
CCNT1O60563 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCNT1O60563 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCNT1O60563 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCNT1O60563 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.62■■■□□ 2.65
CCNT1O60563 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.61■■■□□ 2.65
CCNT1O60563 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.61■■■□□ 2.65
CCNT1O60563 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCNT1O60563 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCNT1O60563 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.59■■■□□ 2.65
CCNT1O60563 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCNT1O60563 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.59■■■□□ 2.65
CCNT1O60563 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCNT1O60563 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.58■■■□□ 2.65
CCNT1O60563 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.57■■■□□ 2.64
CCNT1O60563 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCNT1O60563 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCNT1O60563 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CCNT1O60563 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.53■■■□□ 2.64
CCNT1O60563 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCNT1O60563 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.53■■■□□ 2.64
CCNT1O60563 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CCNT1O60563 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CCNT1O60563 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.51■■■□□ 2.63
CCNT1O60563 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.49■■■□□ 2.63
CCNT1O60563 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.48■■■□□ 2.63
CCNT1O60563 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.47■■■□□ 2.63
CCNT1O60563 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.47■■■□□ 2.63
CCNT1O60563 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CCNT1O60563 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCNT1O60563 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCNT1O60563 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.38■■■□□ 2.61
CCNT1O60563 RARRES2P7-201ENST00000567349 469 ntBASIC31.38■■■□□ 2.61
CCNT1O60563 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCNT1O60563 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCNT1O60563 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCNT1O60563 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCNT1O60563 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.31■■■□□ 2.6
CCNT1O60563 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCNT1O60563 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
CCNT1O60563 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.3■■■□□ 2.6
CCNT1O60563 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.29■■■□□ 2.6
CCNT1O60563 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCNT1O60563 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
CCNT1O60563 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.27■■■□□ 2.6
CCNT1O60563 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CCNT1O60563 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CCNT1O60563 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
CCNT1O60563 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCNT1O60563 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCNT1O60563 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCNT1O60563 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCNT1O60563 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.21■■■□□ 2.59
CCNT1O60563 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCNT1O60563 SETD8P1-201ENST00000623146 1180 ntBASIC31.21■■■□□ 2.59
CCNT1O60563 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CCNT1O60563 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCNT1O60563 AC120057.4-201ENST00000624722 1615 ntBASIC31.19■■■□□ 2.58
CCNT1O60563 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CCNT1O60563 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.18■■■□□ 2.58
CCNT1O60563 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCNT1O60563 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
CCNT1O60563 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CCNT1O60563 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCNT1O60563 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
CCNT1O60563 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.16■■■□□ 2.58
CCNT1O60563 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCNT1O60563 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCNT1O60563 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCNT1O60563 AL133380.1-201ENST00000506013 324 ntBASIC31.15■■■□□ 2.58
CCNT1O60563 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCNT1O60563 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CCNT1O60563 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCNT1O60563 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCNT1O60563 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
CCNT1O60563 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CCNT1O60563 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.09■■■□□ 2.57
CCNT1O60563 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCNT1O60563 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCNT1O60563 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCNT1O60563 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCNT1O60563 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCNT1O60563 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CCNT1O60563 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.02■■■□□ 2.56
CCNT1O60563 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCNT1O60563 AC097358.2-201ENST00000607541 1159 ntBASIC31.01■■■□□ 2.55
CCNT1O60563 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CCNT1O60563 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
CCNT1O60563 AC136428.2-201ENST00000563187 214 ntBASIC31■■■□□ 2.55
CCNT1O60563 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31■■■□□ 2.55
CCNT1O60563 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
CCNT1O60563 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
CCNT1O60563 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.99■■■□□ 2.55
CCNT1O60563 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCNT1O60563 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.97■■■□□ 2.55
CCNT1O60563 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.97■■■□□ 2.55
CCNT1O60563 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms