Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CASQ2O14958 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CASQ2O14958 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CASQ2O14958 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CASQ2O14958 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CASQ2O14958 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CASQ2O14958 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CASQ2O14958 ABCB10P1-201ENST00000614297 2181 ntBASIC26.54■■□□□ 1.84
CASQ2O14958 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.51■■□□□ 1.84
CASQ2O14958 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CASQ2O14958 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CASQ2O14958 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CASQ2O14958 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CASQ2O14958 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CASQ2O14958 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.49■■□□□ 1.83
CASQ2O14958 ABCB10P3-201ENST00000561950 2166 ntBASIC26.48■■□□□ 1.83
CASQ2O14958 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CASQ2O14958 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CASQ2O14958 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.46■■□□□ 1.83
CASQ2O14958 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CASQ2O14958 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CASQ2O14958 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CASQ2O14958 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CASQ2O14958 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CASQ2O14958 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CASQ2O14958 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.42■■□□□ 1.82
CASQ2O14958 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CASQ2O14958 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.4■■□□□ 1.82
CASQ2O14958 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
CASQ2O14958 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.38■■□□□ 1.81
CASQ2O14958 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CASQ2O14958 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CASQ2O14958 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CASQ2O14958 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CASQ2O14958 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CASQ2O14958 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CASQ2O14958 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASQ2O14958 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASQ2O14958 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASQ2O14958 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASQ2O14958 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CASQ2O14958 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.32■■□□□ 1.8
CASQ2O14958 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CASQ2O14958 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASQ2O14958 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
CASQ2O14958 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.29■■□□□ 1.8
CASQ2O14958 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASQ2O14958 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CASQ2O14958 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CASQ2O14958 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CASQ2O14958 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CASQ2O14958 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CASQ2O14958 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CASQ2O14958 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CASQ2O14958 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CASQ2O14958 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CASQ2O14958 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.22■■□□□ 1.79
CASQ2O14958 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CASQ2O14958 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CASQ2O14958 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.19■■□□□ 1.78
CASQ2O14958 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CASQ2O14958 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CASQ2O14958 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CASQ2O14958 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CASQ2O14958 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
CASQ2O14958 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CASQ2O14958 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.13■■□□□ 1.77
CASQ2O14958 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CASQ2O14958 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.12■■□□□ 1.77
CASQ2O14958 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CASQ2O14958 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.09■■□□□ 1.77
CASQ2O14958 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CASQ2O14958 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CASQ2O14958 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CASQ2O14958 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CASQ2O14958 AC139426.1-201ENST00000568218 2529 ntBASIC26.07■■□□□ 1.76
CASQ2O14958 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CASQ2O14958 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
CASQ2O14958 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CASQ2O14958 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.05■■□□□ 1.76
CASQ2O14958 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CASQ2O14958 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
CASQ2O14958 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CASQ2O14958 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.03■■□□□ 1.76
CASQ2O14958 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CASQ2O14958 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CASQ2O14958 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CASQ2O14958 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASQ2O14958 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASQ2O14958 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CASQ2O14958 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CASQ2O14958 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.96■■□□□ 1.75
CASQ2O14958 AC120057.4-201ENST00000624722 1615 ntBASIC25.96■■□□□ 1.75
CASQ2O14958 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CASQ2O14958 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
CASQ2O14958 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.94■■□□□ 1.74
CASQ2O14958 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CASQ2O14958 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CASQ2O14958 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CASQ2O14958 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms