Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.57■■□□□ 1.84
RTCAO00442 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTCAO00442 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
RTCAO00442 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.54■■□□□ 1.84
RTCAO00442 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTCAO00442 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RTCAO00442 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.51■■□□□ 1.83
RTCAO00442 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.5■■□□□ 1.83
RTCAO00442 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.49■■□□□ 1.83
RTCAO00442 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTCAO00442 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.48■■□□□ 1.83
RTCAO00442 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
RTCAO00442 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.46■■□□□ 1.83
RTCAO00442 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.45■■□□□ 1.82
RTCAO00442 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.45■■□□□ 1.82
RTCAO00442 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.43■■□□□ 1.82
RTCAO00442 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RTCAO00442 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.42■■□□□ 1.82
RTCAO00442 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RTCAO00442 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.41■■□□□ 1.82
RTCAO00442 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RTCAO00442 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RTCAO00442 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RTCAO00442 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
RTCAO00442 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCAO00442 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
RTCAO00442 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTCAO00442 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.34■■□□□ 1.81
RTCAO00442 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTCAO00442 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RTCAO00442 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RTCAO00442 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTCAO00442 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RTCAO00442 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.3■■□□□ 1.8
RTCAO00442 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCAO00442 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCAO00442 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCAO00442 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCAO00442 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.28■■□□□ 1.8
RTCAO00442 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
RTCAO00442 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTCAO00442 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTCAO00442 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTCAO00442 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
RTCAO00442 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.26■■□□□ 1.79
RTCAO00442 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.25■■□□□ 1.79
RTCAO00442 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTCAO00442 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.25■■□□□ 1.79
RTCAO00442 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTCAO00442 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTCAO00442 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.23■■□□□ 1.79
RTCAO00442 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.22■■□□□ 1.79
RTCAO00442 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTCAO00442 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTCAO00442 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTCAO00442 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
RTCAO00442 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTCAO00442 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.2■■□□□ 1.79
RTCAO00442 AC120057.4-201ENST00000624722 1615 ntBASIC26.2■■□□□ 1.78
RTCAO00442 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTCAO00442 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.18■■□□□ 1.78
RTCAO00442 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTCAO00442 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RTCAO00442 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTCAO00442 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
RTCAO00442 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTCAO00442 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTCAO00442 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.14■■□□□ 1.78
RTCAO00442 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTCAO00442 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.13■■□□□ 1.77
RTCAO00442 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.11■■□□□ 1.77
RTCAO00442 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RTCAO00442 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTCAO00442 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.09■■□□□ 1.77
RTCAO00442 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTCAO00442 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.08■■□□□ 1.77
RTCAO00442 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTCAO00442 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.07■■□□□ 1.76
RTCAO00442 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RTCAO00442 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
RTCAO00442 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTCAO00442 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTCAO00442 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.05■■□□□ 1.76
RTCAO00442 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RTCAO00442 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTCAO00442 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RTCAO00442 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTCAO00442 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTCAO00442 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTCAO00442 RARRES2P7-201ENST00000567349 469 ntBASIC26■■□□□ 1.75
RTCAO00442 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTCAO00442 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTCAO00442 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTCAO00442 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTCAO00442 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.96■■□□□ 1.75
RTCAO00442 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.96■■□□□ 1.75
RTCAO00442 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.96■■□□□ 1.75
RTCAO00442 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTCAO00442 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.95■■□□□ 1.74
RTCAO00442 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms