Protein–RNA interactions for Protein: A8MX34

KRTAP29-1, Keratin-associated protein 29-1, humanhuman

Predicted RBP Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP29-1A8MX34 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRTAP29-1A8MX34 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRTAP29-1A8MX34 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
KRTAP29-1A8MX34 CAHM-201ENST00000604200 896 ntBASIC17.28■□□□□ 0.36
KRTAP29-1A8MX34 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRTAP29-1A8MX34 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRTAP29-1A8MX34 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRTAP29-1A8MX34 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRTAP29-1A8MX34 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRTAP29-1A8MX34 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KRTAP29-1A8MX34 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.23■□□□□ 0.35
KRTAP29-1A8MX34 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.23■□□□□ 0.35
KRTAP29-1A8MX34 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRTAP29-1A8MX34 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRTAP29-1A8MX34 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRTAP29-1A8MX34 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.22■□□□□ 0.35
KRTAP29-1A8MX34 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.21■□□□□ 0.35
KRTAP29-1A8MX34 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KRTAP29-1A8MX34 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.2■□□□□ 0.34
KRTAP29-1A8MX34 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRTAP29-1A8MX34 HLA-V-202ENST00000446817 847 ntBASIC17.2■□□□□ 0.34
KRTAP29-1A8MX34 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRTAP29-1A8MX34 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.19■□□□□ 0.34
KRTAP29-1A8MX34 AL391121.1-201ENST00000607967 1349 ntBASIC17.19■□□□□ 0.34
KRTAP29-1A8MX34 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRTAP29-1A8MX34 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRTAP29-1A8MX34 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.18■□□□□ 0.34
KRTAP29-1A8MX34 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
KRTAP29-1A8MX34 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
KRTAP29-1A8MX34 MIR3665-201ENST00000578708 105 ntBASIC17.17■□□□□ 0.34
KRTAP29-1A8MX34 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
KRTAP29-1A8MX34 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC17.17■□□□□ 0.34
KRTAP29-1A8MX34 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC17.16■□□□□ 0.34
KRTAP29-1A8MX34 ST7-205ENST00000393446 2114 ntTSL 5 BASIC17.16■□□□□ 0.34
KRTAP29-1A8MX34 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
KRTAP29-1A8MX34 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRTAP29-1A8MX34 ST7-202ENST00000323984 2142 ntTSL 5 BASIC17.13■□□□□ 0.33
KRTAP29-1A8MX34 ST7-207ENST00000393449 2127 ntTSL 5 BASIC17.13■□□□□ 0.33
KRTAP29-1A8MX34 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRTAP29-1A8MX34 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
KRTAP29-1A8MX34 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRTAP29-1A8MX34 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.1■□□□□ 0.33
KRTAP29-1A8MX34 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRTAP29-1A8MX34 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.09■□□□□ 0.33
KRTAP29-1A8MX34 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.08■□□□□ 0.32
KRTAP29-1A8MX34 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
KRTAP29-1A8MX34 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.07■□□□□ 0.32
KRTAP29-1A8MX34 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRTAP29-1A8MX34 AC087741.3-201ENST00000624270 1347 ntBASIC17.06■□□□□ 0.32
KRTAP29-1A8MX34 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.06■□□□□ 0.32
KRTAP29-1A8MX34 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC17.05■□□□□ 0.32
KRTAP29-1A8MX34 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.05■□□□□ 0.32
KRTAP29-1A8MX34 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRTAP29-1A8MX34 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRTAP29-1A8MX34 MVK-208ENST00000539696 608 ntTSL 5 BASIC17.03■□□□□ 0.32
KRTAP29-1A8MX34 AC044849.2-201ENST00000606596 710 ntBASIC17.03■□□□□ 0.32
KRTAP29-1A8MX34 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRTAP29-1A8MX34 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRTAP29-1A8MX34 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRTAP29-1A8MX34 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.01■□□□□ 0.31
KRTAP29-1A8MX34 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17■□□□□ 0.31
KRTAP29-1A8MX34 AL133380.1-201ENST00000506013 324 ntBASIC17■□□□□ 0.31
KRTAP29-1A8MX34 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17■□□□□ 0.31
KRTAP29-1A8MX34 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRTAP29-1A8MX34 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
KRTAP29-1A8MX34 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRTAP29-1A8MX34 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
KRTAP29-1A8MX34 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.97■□□□□ 0.31
KRTAP29-1A8MX34 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
KRTAP29-1A8MX34 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
KRTAP29-1A8MX34 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
KRTAP29-1A8MX34 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.96■□□□□ 0.31
KRTAP29-1A8MX34 DUX4L28-201ENST00000623687 678 ntBASIC16.96■□□□□ 0.31
KRTAP29-1A8MX34 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRTAP29-1A8MX34 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRTAP29-1A8MX34 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRTAP29-1A8MX34 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC16.94■□□□□ 0.3
KRTAP29-1A8MX34 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC16.94■□□□□ 0.3
KRTAP29-1A8MX34 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
KRTAP29-1A8MX34 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRTAP29-1A8MX34 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.93■□□□□ 0.3
KRTAP29-1A8MX34 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KRTAP29-1A8MX34 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KRTAP29-1A8MX34 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KRTAP29-1A8MX34 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.91■□□□□ 0.3
KRTAP29-1A8MX34 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.91■□□□□ 0.3
KRTAP29-1A8MX34 ZNRF2P2-203ENST00000454624 420 ntBASIC16.91■□□□□ 0.3
KRTAP29-1A8MX34 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KRTAP29-1A8MX34 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
KRTAP29-1A8MX34 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRTAP29-1A8MX34 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KRTAP29-1A8MX34 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.88■□□□□ 0.29
KRTAP29-1A8MX34 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC16.88■□□□□ 0.29
KRTAP29-1A8MX34 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.87■□□□□ 0.29
KRTAP29-1A8MX34 AC005559.1-201ENST00000589661 871 ntBASIC16.87■□□□□ 0.29
KRTAP29-1A8MX34 MIR762-201ENST00000390236 83 ntBASIC16.86■□□□□ 0.29
KRTAP29-1A8MX34 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
KRTAP29-1A8MX34 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRTAP29-1A8MX34 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRTAP29-1A8MX34 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms