Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC34.76■■■■□ 3.16
PNMA6EA0A0J9YXQ4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC34.75■■■■□ 3.15
PNMA6EA0A0J9YXQ4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
PNMA6EA0A0J9YXQ4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.72■■■■□ 3.15
PNMA6EA0A0J9YXQ4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
PNMA6EA0A0J9YXQ4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC34.72■■■■□ 3.15
PNMA6EA0A0J9YXQ4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
PNMA6EA0A0J9YXQ4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
PNMA6EA0A0J9YXQ4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC34.68■■■■□ 3.14
PNMA6EA0A0J9YXQ4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.66■■■■□ 3.14
PNMA6EA0A0J9YXQ4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC34.65■■■■□ 3.14
PNMA6EA0A0J9YXQ4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC34.65■■■■□ 3.14
PNMA6EA0A0J9YXQ4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC34.64■■■■□ 3.14
PNMA6EA0A0J9YXQ4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.63■■■■□ 3.13
PNMA6EA0A0J9YXQ4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
PNMA6EA0A0J9YXQ4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
PNMA6EA0A0J9YXQ4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
PNMA6EA0A0J9YXQ4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
PNMA6EA0A0J9YXQ4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC34.6■■■■□ 3.13
PNMA6EA0A0J9YXQ4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
PNMA6EA0A0J9YXQ4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC34.59■■■■□ 3.13
PNMA6EA0A0J9YXQ4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC34.57■■■■□ 3.12
PNMA6EA0A0J9YXQ4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC34.57■■■■□ 3.12
PNMA6EA0A0J9YXQ4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC34.55■■■■□ 3.12
PNMA6EA0A0J9YXQ4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC34.55■■■■□ 3.12
PNMA6EA0A0J9YXQ4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
PNMA6EA0A0J9YXQ4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
PNMA6EA0A0J9YXQ4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PNMA6EA0A0J9YXQ4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
PNMA6EA0A0J9YXQ4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC34.53■■■■□ 3.12
PNMA6EA0A0J9YXQ4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC34.52■■■■□ 3.12
PNMA6EA0A0J9YXQ4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC34.52■■■■□ 3.12
PNMA6EA0A0J9YXQ4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.12
PNMA6EA0A0J9YXQ4 RARRES2P7-201ENST00000567349 469 ntBASIC34.5■■■■□ 3.11
PNMA6EA0A0J9YXQ4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PNMA6EA0A0J9YXQ4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
PNMA6EA0A0J9YXQ4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PNMA6EA0A0J9YXQ4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PNMA6EA0A0J9YXQ4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
PNMA6EA0A0J9YXQ4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC34.43■■■■□ 3.1
PNMA6EA0A0J9YXQ4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
PNMA6EA0A0J9YXQ4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
PNMA6EA0A0J9YXQ4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
PNMA6EA0A0J9YXQ4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC34.38■■■■□ 3.09
PNMA6EA0A0J9YXQ4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
PNMA6EA0A0J9YXQ4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
PNMA6EA0A0J9YXQ4 SETD8P1-201ENST00000623146 1180 ntBASIC34.36■■■■□ 3.09
PNMA6EA0A0J9YXQ4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC34.36■■■■□ 3.09
PNMA6EA0A0J9YXQ4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
PNMA6EA0A0J9YXQ4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC34.32■■■■□ 3.08
PNMA6EA0A0J9YXQ4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
PNMA6EA0A0J9YXQ4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
PNMA6EA0A0J9YXQ4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC34.3■■■■□ 3.08
PNMA6EA0A0J9YXQ4 AL133380.1-201ENST00000506013 324 ntBASIC34.29■■■■□ 3.08
PNMA6EA0A0J9YXQ4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC34.28■■■■□ 3.08
PNMA6EA0A0J9YXQ4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
PNMA6EA0A0J9YXQ4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
PNMA6EA0A0J9YXQ4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC34.25■■■■□ 3.07
PNMA6EA0A0J9YXQ4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC34.25■■■■□ 3.07
PNMA6EA0A0J9YXQ4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC34.25■■■■□ 3.07
PNMA6EA0A0J9YXQ4 AC136428.2-201ENST00000563187 214 ntBASIC34.24■■■■□ 3.07
PNMA6EA0A0J9YXQ4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
PNMA6EA0A0J9YXQ4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC34.21■■■■□ 3.07
PNMA6EA0A0J9YXQ4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC34.2■■■■□ 3.07
PNMA6EA0A0J9YXQ4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC34.2■■■■□ 3.07
PNMA6EA0A0J9YXQ4 AC120057.4-201ENST00000624722 1615 ntBASIC34.19■■■■□ 3.06
PNMA6EA0A0J9YXQ4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
PNMA6EA0A0J9YXQ4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
PNMA6EA0A0J9YXQ4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC34.18■■■■□ 3.06
PNMA6EA0A0J9YXQ4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC34.18■■■■□ 3.06
PNMA6EA0A0J9YXQ4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PNMA6EA0A0J9YXQ4 AC097358.2-201ENST00000607541 1159 ntBASIC34.16■■■■□ 3.06
PNMA6EA0A0J9YXQ4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
PNMA6EA0A0J9YXQ4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC34.16■■■■□ 3.06
PNMA6EA0A0J9YXQ4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
PNMA6EA0A0J9YXQ4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC34.15■■■■□ 3.06
PNMA6EA0A0J9YXQ4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC34.15■■■■□ 3.06
PNMA6EA0A0J9YXQ4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
PNMA6EA0A0J9YXQ4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
PNMA6EA0A0J9YXQ4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
PNMA6EA0A0J9YXQ4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
PNMA6EA0A0J9YXQ4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC34.11■■■■□ 3.05
PNMA6EA0A0J9YXQ4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
PNMA6EA0A0J9YXQ4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
PNMA6EA0A0J9YXQ4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
PNMA6EA0A0J9YXQ4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.1■■■■□ 3.05
PNMA6EA0A0J9YXQ4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
PNMA6EA0A0J9YXQ4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC34.07■■■■□ 3.04
PNMA6EA0A0J9YXQ4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC34.07■■■■□ 3.04
PNMA6EA0A0J9YXQ4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC34.05■■■■□ 3.04
PNMA6EA0A0J9YXQ4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
PNMA6EA0A0J9YXQ4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
PNMA6EA0A0J9YXQ4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC34.04■■■■□ 3.04
PNMA6EA0A0J9YXQ4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
PNMA6EA0A0J9YXQ4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
PNMA6EA0A0J9YXQ4 CAHM-201ENST00000604200 896 ntBASIC34.02■■■■□ 3.04
PNMA6EA0A0J9YXQ4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
PNMA6EA0A0J9YXQ4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
PNMA6EA0A0J9YXQ4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.03
PNMA6EA0A0J9YXQ4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC34■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms