Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRAV8-1A0A0A6YYK1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV8-1A0A0A6YYK1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAV8-1A0A0A6YYK1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV8-1A0A0A6YYK1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV8-1A0A0A6YYK1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV8-1A0A0A6YYK1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV8-1A0A0A6YYK1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV8-1A0A0A6YYK1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV8-1A0A0A6YYK1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRAV8-1A0A0A6YYK1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV8-1A0A0A6YYK1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV8-1A0A0A6YYK1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV8-1A0A0A6YYK1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRAV8-1A0A0A6YYK1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV8-1A0A0A6YYK1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.01■□□□□ 0.95
TRAV8-1A0A0A6YYK1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV8-1A0A0A6YYK1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV8-1A0A0A6YYK1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV8-1A0A0A6YYK1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV8-1A0A0A6YYK1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV8-1A0A0A6YYK1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV8-1A0A0A6YYK1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV8-1A0A0A6YYK1 ABCB10P1-201ENST00000614297 2181 ntBASIC20.96■□□□□ 0.95
TRAV8-1A0A0A6YYK1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.95■□□□□ 0.94
TRAV8-1A0A0A6YYK1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV8-1A0A0A6YYK1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV8-1A0A0A6YYK1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.93■□□□□ 0.94
TRAV8-1A0A0A6YYK1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV8-1A0A0A6YYK1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV8-1A0A0A6YYK1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV8-1A0A0A6YYK1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV8-1A0A0A6YYK1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TRAV8-1A0A0A6YYK1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV8-1A0A0A6YYK1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV8-1A0A0A6YYK1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV8-1A0A0A6YYK1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV8-1A0A0A6YYK1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV8-1A0A0A6YYK1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV8-1A0A0A6YYK1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV8-1A0A0A6YYK1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
TRAV8-1A0A0A6YYK1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV8-1A0A0A6YYK1 AC120057.4-201ENST00000624722 1615 ntBASIC20.86■□□□□ 0.93
TRAV8-1A0A0A6YYK1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV8-1A0A0A6YYK1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV8-1A0A0A6YYK1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TRAV8-1A0A0A6YYK1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.84■□□□□ 0.93
TRAV8-1A0A0A6YYK1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRAV8-1A0A0A6YYK1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV8-1A0A0A6YYK1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV8-1A0A0A6YYK1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV8-1A0A0A6YYK1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV8-1A0A0A6YYK1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAV8-1A0A0A6YYK1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC20.8■□□□□ 0.92
TRAV8-1A0A0A6YYK1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV8-1A0A0A6YYK1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV8-1A0A0A6YYK1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAV8-1A0A0A6YYK1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAV8-1A0A0A6YYK1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV8-1A0A0A6YYK1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV8-1A0A0A6YYK1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV8-1A0A0A6YYK1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV8-1A0A0A6YYK1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV8-1A0A0A6YYK1 ABCB10P3-201ENST00000561950 2166 ntBASIC20.76■□□□□ 0.91
TRAV8-1A0A0A6YYK1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV8-1A0A0A6YYK1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV8-1A0A0A6YYK1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV8-1A0A0A6YYK1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRAV8-1A0A0A6YYK1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV8-1A0A0A6YYK1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV8-1A0A0A6YYK1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV8-1A0A0A6YYK1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV8-1A0A0A6YYK1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
TRAV8-1A0A0A6YYK1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV8-1A0A0A6YYK1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV8-1A0A0A6YYK1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.69■□□□□ 0.9
TRAV8-1A0A0A6YYK1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAV8-1A0A0A6YYK1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV8-1A0A0A6YYK1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV8-1A0A0A6YYK1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV8-1A0A0A6YYK1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
TRAV8-1A0A0A6YYK1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV8-1A0A0A6YYK1 AC139426.1-201ENST00000568218 2529 ntBASIC20.66■□□□□ 0.9
TRAV8-1A0A0A6YYK1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAV8-1A0A0A6YYK1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRAV8-1A0A0A6YYK1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV8-1A0A0A6YYK1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV8-1A0A0A6YYK1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRAV8-1A0A0A6YYK1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV8-1A0A0A6YYK1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
TRAV8-1A0A0A6YYK1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV8-1A0A0A6YYK1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV8-1A0A0A6YYK1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV8-1A0A0A6YYK1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV8-1A0A0A6YYK1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV8-1A0A0A6YYK1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TRAV8-1A0A0A6YYK1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV8-1A0A0A6YYK1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TRAV8-1A0A0A6YYK1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TRAV8-1A0A0A6YYK1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms