Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IGKV2-28A0A075B6P5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGKV2-28A0A075B6P5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV2-28A0A075B6P5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV2-28A0A075B6P5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV2-28A0A075B6P5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV2-28A0A075B6P5 ABCB10P1-201ENST00000614297 2181 ntBASIC18.32■□□□□ 0.52
IGKV2-28A0A075B6P5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV2-28A0A075B6P5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV2-28A0A075B6P5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV2-28A0A075B6P5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.31■□□□□ 0.52
IGKV2-28A0A075B6P5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC18.3■□□□□ 0.52
IGKV2-28A0A075B6P5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV2-28A0A075B6P5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV2-28A0A075B6P5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.27■□□□□ 0.51
IGKV2-28A0A075B6P5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
IGKV2-28A0A075B6P5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IGKV2-28A0A075B6P5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV2-28A0A075B6P5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
IGKV2-28A0A075B6P5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.25■□□□□ 0.51
IGKV2-28A0A075B6P5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IGKV2-28A0A075B6P5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV2-28A0A075B6P5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV2-28A0A075B6P5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV2-28A0A075B6P5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IGKV2-28A0A075B6P5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV2-28A0A075B6P5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.23■□□□□ 0.51
IGKV2-28A0A075B6P5 ABCB10P3-201ENST00000561950 2166 ntBASIC18.23■□□□□ 0.51
IGKV2-28A0A075B6P5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV2-28A0A075B6P5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV2-28A0A075B6P5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV2-28A0A075B6P5 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IGKV2-28A0A075B6P5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
IGKV2-28A0A075B6P5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV2-28A0A075B6P5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV2-28A0A075B6P5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.22■□□□□ 0.51
IGKV2-28A0A075B6P5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
IGKV2-28A0A075B6P5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.21■□□□□ 0.51
IGKV2-28A0A075B6P5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
IGKV2-28A0A075B6P5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
IGKV2-28A0A075B6P5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV2-28A0A075B6P5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
IGKV2-28A0A075B6P5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV2-28A0A075B6P5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
IGKV2-28A0A075B6P5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV2-28A0A075B6P5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV2-28A0A075B6P5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.18■□□□□ 0.5
IGKV2-28A0A075B6P5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IGKV2-28A0A075B6P5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV2-28A0A075B6P5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV2-28A0A075B6P5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV2-28A0A075B6P5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IGKV2-28A0A075B6P5 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV2-28A0A075B6P5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IGKV2-28A0A075B6P5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.14■□□□□ 0.49
IGKV2-28A0A075B6P5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV2-28A0A075B6P5 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IGKV2-28A0A075B6P5 AL161658.1-201ENST00000623641 1967 ntBASIC18.12■□□□□ 0.49
IGKV2-28A0A075B6P5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV2-28A0A075B6P5 AC015813.7-201ENST00000623294 581 ntBASIC18.12■□□□□ 0.49
IGKV2-28A0A075B6P5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV2-28A0A075B6P5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV2-28A0A075B6P5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV2-28A0A075B6P5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV2-28A0A075B6P5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV2-28A0A075B6P5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV2-28A0A075B6P5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV2-28A0A075B6P5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.08■□□□□ 0.48
IGKV2-28A0A075B6P5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV2-28A0A075B6P5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
IGKV2-28A0A075B6P5 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV2-28A0A075B6P5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.06■□□□□ 0.48
IGKV2-28A0A075B6P5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
IGKV2-28A0A075B6P5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV2-28A0A075B6P5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV2-28A0A075B6P5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV2-28A0A075B6P5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IGKV2-28A0A075B6P5 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IGKV2-28A0A075B6P5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.02■□□□□ 0.47
IGKV2-28A0A075B6P5 AC139426.1-201ENST00000568218 2529 ntBASIC18.02■□□□□ 0.47
IGKV2-28A0A075B6P5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.01■□□□□ 0.47
IGKV2-28A0A075B6P5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18■□□□□ 0.47
IGKV2-28A0A075B6P5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
IGKV2-28A0A075B6P5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV2-28A0A075B6P5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
IGKV2-28A0A075B6P5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV2-28A0A075B6P5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC17.99■□□□□ 0.47
IGKV2-28A0A075B6P5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
IGKV2-28A0A075B6P5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
IGKV2-28A0A075B6P5 AC120057.4-201ENST00000624722 1615 ntBASIC17.98■□□□□ 0.47
IGKV2-28A0A075B6P5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.97■□□□□ 0.47
IGKV2-28A0A075B6P5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IGKV2-28A0A075B6P5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IGKV2-28A0A075B6P5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC17.95■□□□□ 0.46
IGKV2-28A0A075B6P5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC17.95■□□□□ 0.46
IGKV2-28A0A075B6P5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
IGKV2-28A0A075B6P5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC17.94■□□□□ 0.46
IGKV2-28A0A075B6P5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IGKV2-28A0A075B6P5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IGKV2-28A0A075B6P5 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms