Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.26■■■□□ 2.27
ARRDC3Q96B67 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ARRDC3Q96B67 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ARRDC3Q96B67 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.26
ARRDC3Q96B67 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
ARRDC3Q96B67 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
ARRDC3Q96B67 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
ARRDC3Q96B67 AL031258.1-201ENST00000623562 325 ntBASIC29.12■■■□□ 2.25
ARRDC3Q96B67 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ARRDC3Q96B67 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.1■■■□□ 2.25
ARRDC3Q96B67 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
ARRDC3Q96B67 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.07■■■□□ 2.24
ARRDC3Q96B67 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
ARRDC3Q96B67 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
ARRDC3Q96B67 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
ARRDC3Q96B67 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.02■■■□□ 2.24
ARRDC3Q96B67 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
ARRDC3Q96B67 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
ARRDC3Q96B67 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
ARRDC3Q96B67 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
ARRDC3Q96B67 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29■■■□□ 2.23
ARRDC3Q96B67 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.97■■■□□ 2.23
ARRDC3Q96B67 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
ARRDC3Q96B67 AC145285.7-201ENST00000614819 1539 ntBASIC28.94■■■□□ 2.22
ARRDC3Q96B67 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ARRDC3Q96B67 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
ARRDC3Q96B67 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
ARRDC3Q96B67 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
ARRDC3Q96B67 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.86■■■□□ 2.21
ARRDC3Q96B67 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.86■■■□□ 2.21
ARRDC3Q96B67 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ARRDC3Q96B67 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.84■■■□□ 2.21
ARRDC3Q96B67 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.8■■■□□ 2.2
ARRDC3Q96B67 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.78■■■□□ 2.2
ARRDC3Q96B67 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
ARRDC3Q96B67 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.77■■■□□ 2.2
ARRDC3Q96B67 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARRDC3Q96B67 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ARRDC3Q96B67 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ARRDC3Q96B67 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.72■■■□□ 2.19
ARRDC3Q96B67 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.72■■■□□ 2.19
ARRDC3Q96B67 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
ARRDC3Q96B67 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
ARRDC3Q96B67 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ARRDC3Q96B67 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ARRDC3Q96B67 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.67■■■□□ 2.18
ARRDC3Q96B67 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.64■■■□□ 2.18
ARRDC3Q96B67 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.63■■■□□ 2.17
ARRDC3Q96B67 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
ARRDC3Q96B67 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ARRDC3Q96B67 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
ARRDC3Q96B67 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
ARRDC3Q96B67 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
ARRDC3Q96B67 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
ARRDC3Q96B67 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.53■■■□□ 2.16
ARRDC3Q96B67 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ARRDC3Q96B67 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ARRDC3Q96B67 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
ARRDC3Q96B67 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
ARRDC3Q96B67 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ARRDC3Q96B67 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ARRDC3Q96B67 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ARRDC3Q96B67 RARRES2P7-201ENST00000567349 469 ntBASIC28.48■■■□□ 2.15
ARRDC3Q96B67 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
ARRDC3Q96B67 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
ARRDC3Q96B67 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.45■■■□□ 2.14
ARRDC3Q96B67 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.45■■■□□ 2.14
ARRDC3Q96B67 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.44■■■□□ 2.14
ARRDC3Q96B67 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.43■■■□□ 2.14
ARRDC3Q96B67 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.43■■■□□ 2.14
ARRDC3Q96B67 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ARRDC3Q96B67 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ARRDC3Q96B67 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.39■■■□□ 2.14
ARRDC3Q96B67 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ARRDC3Q96B67 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
ARRDC3Q96B67 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
ARRDC3Q96B67 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.35■■■□□ 2.13
ARRDC3Q96B67 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.35■■■□□ 2.13
ARRDC3Q96B67 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ARRDC3Q96B67 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ARRDC3Q96B67 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ARRDC3Q96B67 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.31■■■□□ 2.12
ARRDC3Q96B67 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.31■■■□□ 2.12
ARRDC3Q96B67 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
ARRDC3Q96B67 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.3■■■□□ 2.12
ARRDC3Q96B67 SETD8P1-201ENST00000623146 1180 ntBASIC28.29■■■□□ 2.12
ARRDC3Q96B67 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ARRDC3Q96B67 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.26■■■□□ 2.11
ARRDC3Q96B67 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARRDC3Q96B67 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARRDC3Q96B67 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARRDC3Q96B67 AC097358.2-201ENST00000607541 1159 ntBASIC28.21■■■□□ 2.11
ARRDC3Q96B67 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ARRDC3Q96B67 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARRDC3Q96B67 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.19■■■□□ 2.1
ARRDC3Q96B67 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.19■■■□□ 2.1
ARRDC3Q96B67 AC136428.2-201ENST00000563187 214 ntBASIC28.19■■■□□ 2.1
ARRDC3Q96B67 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.15■■■□□ 2.1
ARRDC3Q96B67 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.15■■■□□ 2.1
ARRDC3Q96B67 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms