Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.7■■■■□ 3.14
ARRDC3Q96B67 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
ARRDC3Q96B67 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.66■■■□□ 2.98
ARRDC3Q96B67 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
ARRDC3Q96B67 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.58■■■□□ 2.97
ARRDC3Q96B67 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
ARRDC3Q96B67 AL356512.1-201ENST00000607453 1739 ntBASIC33.49■■■□□ 2.95
ARRDC3Q96B67 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.09■■■□□ 2.89
ARRDC3Q96B67 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.68■■■□□ 2.82
ARRDC3Q96B67 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.63■■■□□ 2.81
ARRDC3Q96B67 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.45■■■□□ 2.78
ARRDC3Q96B67 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
ARRDC3Q96B67 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
ARRDC3Q96B67 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.34■■■□□ 2.77
ARRDC3Q96B67 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.21■■■□□ 2.75
ARRDC3Q96B67 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.2■■■□□ 2.75
ARRDC3Q96B67 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.12■■■□□ 2.73
ARRDC3Q96B67 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
ARRDC3Q96B67 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ARRDC3Q96B67 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
ARRDC3Q96B67 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.8■■■□□ 2.68
ARRDC3Q96B67 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
ARRDC3Q96B67 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ARRDC3Q96B67 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ARRDC3Q96B67 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ARRDC3Q96B67 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARRDC3Q96B67 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ARRDC3Q96B67 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ARRDC3Q96B67 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
ARRDC3Q96B67 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.2■■■□□ 2.59
ARRDC3Q96B67 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ARRDC3Q96B67 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.12■■■□□ 2.57
ARRDC3Q96B67 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
ARRDC3Q96B67 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
ARRDC3Q96B67 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.95■■■□□ 2.55
ARRDC3Q96B67 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
ARRDC3Q96B67 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ARRDC3Q96B67 AC015813.7-201ENST00000623294 581 ntBASIC30.7■■■□□ 2.51
ARRDC3Q96B67 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.67■■■□□ 2.5
ARRDC3Q96B67 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARRDC3Q96B67 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.63■■■□□ 2.49
ARRDC3Q96B67 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARRDC3Q96B67 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ARRDC3Q96B67 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.54■■■□□ 2.48
ARRDC3Q96B67 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARRDC3Q96B67 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.49■■■□□ 2.47
ARRDC3Q96B67 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.48■■■□□ 2.47
ARRDC3Q96B67 AC006077.2-201ENST00000623591 457 ntBASIC30.42■■■□□ 2.46
ARRDC3Q96B67 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
ARRDC3Q96B67 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.36■■■□□ 2.45
ARRDC3Q96B67 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
ARRDC3Q96B67 ZNRF2P1-201ENST00000441407 443 ntBASIC30.35■■■□□ 2.45
ARRDC3Q96B67 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
ARRDC3Q96B67 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.26■■■□□ 2.43
ARRDC3Q96B67 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ARRDC3Q96B67 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ARRDC3Q96B67 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
ARRDC3Q96B67 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
ARRDC3Q96B67 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
ARRDC3Q96B67 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.1■■■□□ 2.41
ARRDC3Q96B67 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ARRDC3Q96B67 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
ARRDC3Q96B67 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ARRDC3Q96B67 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
ARRDC3Q96B67 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ARRDC3Q96B67 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
ARRDC3Q96B67 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ARRDC3Q96B67 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ARRDC3Q96B67 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.74■■■□□ 2.35
ARRDC3Q96B67 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ARRDC3Q96B67 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
ARRDC3Q96B67 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
ARRDC3Q96B67 AP002365.1-201ENST00000603448 772 ntBASIC29.63■■■□□ 2.33
ARRDC3Q96B67 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.61■■■□□ 2.33
ARRDC3Q96B67 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.6■■■□□ 2.33
ARRDC3Q96B67 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
ARRDC3Q96B67 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.54■■■□□ 2.32
ARRDC3Q96B67 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.53■■■□□ 2.32
ARRDC3Q96B67 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.52■■■□□ 2.32
ARRDC3Q96B67 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
ARRDC3Q96B67 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ARRDC3Q96B67 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.5■■■□□ 2.31
ARRDC3Q96B67 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
ARRDC3Q96B67 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.48■■■□□ 2.31
ARRDC3Q96B67 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
ARRDC3Q96B67 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ARRDC3Q96B67 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ARRDC3Q96B67 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ARRDC3Q96B67 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.37■■■□□ 2.29
ARRDC3Q96B67 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.36■■■□□ 2.29
ARRDC3Q96B67 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ARRDC3Q96B67 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
ARRDC3Q96B67 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ARRDC3Q96B67 DYNLL1-208ENST00000550178 581 ntBASIC29.33■■■□□ 2.29
ARRDC3Q96B67 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ARRDC3Q96B67 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ARRDC3Q96B67 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
ARRDC3Q96B67 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.28■■■□□ 2.28
ARRDC3Q96B67 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.27■■■□□ 2.28
ARRDC3Q96B67 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms