Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
IGKV3D-7A0A0C4DH55 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IGKV3D-7A0A0C4DH55 AC139426.1-201ENST00000568218 2529 ntBASIC18.17■□□□□ 0.5
IGKV3D-7A0A0C4DH55 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
IGKV3D-7A0A0C4DH55 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IGKV3D-7A0A0C4DH55 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
IGKV3D-7A0A0C4DH55 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV3D-7A0A0C4DH55 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV3D-7A0A0C4DH55 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV3D-7A0A0C4DH55 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC18.07■□□□□ 0.48
IGKV3D-7A0A0C4DH55 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IGKV3D-7A0A0C4DH55 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
IGKV3D-7A0A0C4DH55 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGKV3D-7A0A0C4DH55 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC18.05■□□□□ 0.48
IGKV3D-7A0A0C4DH55 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGKV3D-7A0A0C4DH55 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-7A0A0C4DH55 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
IGKV3D-7A0A0C4DH55 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
IGKV3D-7A0A0C4DH55 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV3D-7A0A0C4DH55 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV3D-7A0A0C4DH55 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV3D-7A0A0C4DH55 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IGKV3D-7A0A0C4DH55 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IGKV3D-7A0A0C4DH55 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IGKV3D-7A0A0C4DH55 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
IGKV3D-7A0A0C4DH55 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IGKV3D-7A0A0C4DH55 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC17.98■□□□□ 0.47
IGKV3D-7A0A0C4DH55 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
IGKV3D-7A0A0C4DH55 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IGKV3D-7A0A0C4DH55 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IGKV3D-7A0A0C4DH55 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.96■□□□□ 0.47
IGKV3D-7A0A0C4DH55 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
IGKV3D-7A0A0C4DH55 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC17.95■□□□□ 0.46
IGKV3D-7A0A0C4DH55 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
IGKV3D-7A0A0C4DH55 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC17.95■□□□□ 0.46
IGKV3D-7A0A0C4DH55 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IGKV3D-7A0A0C4DH55 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
IGKV3D-7A0A0C4DH55 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
IGKV3D-7A0A0C4DH55 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
IGKV3D-7A0A0C4DH55 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IGKV3D-7A0A0C4DH55 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC17.93■□□□□ 0.46
IGKV3D-7A0A0C4DH55 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IGKV3D-7A0A0C4DH55 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IGKV3D-7A0A0C4DH55 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
IGKV3D-7A0A0C4DH55 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IGKV3D-7A0A0C4DH55 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IGKV3D-7A0A0C4DH55 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IGKV3D-7A0A0C4DH55 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
IGKV3D-7A0A0C4DH55 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
IGKV3D-7A0A0C4DH55 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
IGKV3D-7A0A0C4DH55 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IGKV3D-7A0A0C4DH55 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IGKV3D-7A0A0C4DH55 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
IGKV3D-7A0A0C4DH55 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC17.87■□□□□ 0.45
IGKV3D-7A0A0C4DH55 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
IGKV3D-7A0A0C4DH55 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
IGKV3D-7A0A0C4DH55 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV3D-7A0A0C4DH55 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV3D-7A0A0C4DH55 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC17.86■□□□□ 0.45
IGKV3D-7A0A0C4DH55 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV3D-7A0A0C4DH55 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGKV3D-7A0A0C4DH55 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
IGKV3D-7A0A0C4DH55 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IGKV3D-7A0A0C4DH55 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGKV3D-7A0A0C4DH55 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGKV3D-7A0A0C4DH55 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV3D-7A0A0C4DH55 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV3D-7A0A0C4DH55 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV3D-7A0A0C4DH55 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV3D-7A0A0C4DH55 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IGKV3D-7A0A0C4DH55 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGKV3D-7A0A0C4DH55 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGKV3D-7A0A0C4DH55 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGKV3D-7A0A0C4DH55 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
IGKV3D-7A0A0C4DH55 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV3D-7A0A0C4DH55 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV3D-7A0A0C4DH55 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV3D-7A0A0C4DH55 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC17.7■□□□□ 0.42
IGKV3D-7A0A0C4DH55 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-7A0A0C4DH55 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-7A0A0C4DH55 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-7A0A0C4DH55 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-7A0A0C4DH55 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV3D-7A0A0C4DH55 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-7A0A0C4DH55 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-7A0A0C4DH55 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV3D-7A0A0C4DH55 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IGKV3D-7A0A0C4DH55 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
IGKV3D-7A0A0C4DH55 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.66■□□□□ 0.42
IGKV3D-7A0A0C4DH55 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
IGKV3D-7A0A0C4DH55 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV3D-7A0A0C4DH55 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV3D-7A0A0C4DH55 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGKV3D-7A0A0C4DH55 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.61■□□□□ 0.41
IGKV3D-7A0A0C4DH55 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
IGKV3D-7A0A0C4DH55 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV3D-7A0A0C4DH55 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV3D-7A0A0C4DH55 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV3D-7A0A0C4DH55 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
IGKV3D-7A0A0C4DH55 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms