Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NCLNQ969V3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.41■■□□□ 1.34
NCLNQ969V3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.4■■□□□ 1.34
NCLNQ969V3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.4■■□□□ 1.34
NCLNQ969V3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NCLNQ969V3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.4■■□□□ 1.34
NCLNQ969V3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.4■■□□□ 1.34
NCLNQ969V3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
NCLNQ969V3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NCLNQ969V3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
NCLNQ969V3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
NCLNQ969V3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
NCLNQ969V3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
NCLNQ969V3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.39■■□□□ 1.34
NCLNQ969V3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NCLNQ969V3 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.39■■□□□ 1.33
NCLNQ969V3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.39■■□□□ 1.33
NCLNQ969V3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NCLNQ969V3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NCLNQ969V3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NCLNQ969V3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NCLNQ969V3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NCLNQ969V3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.38■■□□□ 1.33
NCLNQ969V3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
NCLNQ969V3 AC020928.2-201ENST00000588717 2197 ntBASIC23.37■■□□□ 1.33
NCLNQ969V3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NCLNQ969V3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NCLNQ969V3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NCLNQ969V3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NCLNQ969V3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NCLNQ969V3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
NCLNQ969V3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NCLNQ969V3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NCLNQ969V3 AP004609.3-201ENST00000610705 1884 ntBASIC23.35■■□□□ 1.33
NCLNQ969V3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NCLNQ969V3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NCLNQ969V3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NCLNQ969V3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NCLNQ969V3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
NCLNQ969V3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NCLNQ969V3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
NCLNQ969V3 HSD17B1P1-201ENST00000590052 955 ntBASIC23.33■■□□□ 1.33
NCLNQ969V3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NCLNQ969V3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NCLNQ969V3 AC092803.2-201ENST00000564287 1899 ntBASIC23.32■■□□□ 1.32
NCLNQ969V3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.32■■□□□ 1.32
NCLNQ969V3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.32■■□□□ 1.32
NCLNQ969V3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.32■■□□□ 1.32
NCLNQ969V3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NCLNQ969V3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NCLNQ969V3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NCLNQ969V3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
NCLNQ969V3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NCLNQ969V3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NCLNQ969V3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.31■■□□□ 1.32
NCLNQ969V3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
NCLNQ969V3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.31■■□□□ 1.32
NCLNQ969V3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NCLNQ969V3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NCLNQ969V3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NCLNQ969V3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NCLNQ969V3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NCLNQ969V3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
NCLNQ969V3 GPX1-201ENST00000419349 1106 ntBASIC23.29■■□□□ 1.32
NCLNQ969V3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.29■■□□□ 1.32
NCLNQ969V3 AC022413.1-201ENST00000624602 984 ntBASIC23.29■■□□□ 1.32
NCLNQ969V3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NCLNQ969V3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NCLNQ969V3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NCLNQ969V3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NCLNQ969V3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NCLNQ969V3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.28■■□□□ 1.32
NCLNQ969V3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NCLNQ969V3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NCLNQ969V3 DUSP8P4-201ENST00000399538 1761 ntBASIC23.28■■□□□ 1.32
NCLNQ969V3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
NCLNQ969V3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.28■■□□□ 1.32
NCLNQ969V3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
NCLNQ969V3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
NCLNQ969V3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
NCLNQ969V3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.27■■□□□ 1.32
NCLNQ969V3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.27■■□□□ 1.32
NCLNQ969V3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.27■■□□□ 1.32
NCLNQ969V3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
NCLNQ969V3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
NCLNQ969V3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
NCLNQ969V3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.26■■□□□ 1.31
NCLNQ969V3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.26■■□□□ 1.31
NCLNQ969V3 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.26■■□□□ 1.31
NCLNQ969V3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NCLNQ969V3 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.26■■□□□ 1.31
NCLNQ969V3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NCLNQ969V3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NCLNQ969V3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCLNQ969V3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NCLNQ969V3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.25■■□□□ 1.31
NCLNQ969V3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NCLNQ969V3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCLNQ969V3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NCLNQ969V3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms