Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PAX4O43316 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.25■□□□□ 0.35
PAX4O43316 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.25■□□□□ 0.35
PAX4O43316 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX4O43316 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX4O43316 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PAX4O43316 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX4O43316 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PAX4O43316 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PAX4O43316 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX4O43316 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PAX4O43316 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAX4O43316 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.23■□□□□ 0.35
PAX4O43316 GPX1-201ENST00000419349 1106 ntBASIC17.23■□□□□ 0.35
PAX4O43316 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.23■□□□□ 0.35
PAX4O43316 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.23■□□□□ 0.35
PAX4O43316 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAX4O43316 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PAX4O43316 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PAX4O43316 AL359504.2-201ENST00000605506 1601 ntBASIC17.22■□□□□ 0.35
PAX4O43316 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAX4O43316 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAX4O43316 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAX4O43316 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.22■□□□□ 0.35
PAX4O43316 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.22■□□□□ 0.35
PAX4O43316 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PAX4O43316 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.21■□□□□ 0.35
PAX4O43316 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PAX4O43316 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.21■□□□□ 0.35
PAX4O43316 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PAX4O43316 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PAX4O43316 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAX4O43316 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAX4O43316 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PAX4O43316 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.2■□□□□ 0.34
PAX4O43316 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PAX4O43316 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.2■□□□□ 0.34
PAX4O43316 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.2■□□□□ 0.34
PAX4O43316 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PAX4O43316 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PAX4O43316 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAX4O43316 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAX4O43316 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAX4O43316 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAX4O43316 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PAX4O43316 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.19■□□□□ 0.34
PAX4O43316 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAX4O43316 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAX4O43316 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PAX4O43316 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PAX4O43316 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAX4O43316 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAX4O43316 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.18■□□□□ 0.34
PAX4O43316 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAX4O43316 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.18■□□□□ 0.34
PAX4O43316 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAX4O43316 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAX4O43316 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAX4O43316 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAX4O43316 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.18■□□□□ 0.34
PAX4O43316 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAX4O43316 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.18■□□□□ 0.34
PAX4O43316 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.17■□□□□ 0.34
PAX4O43316 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.17■□□□□ 0.34
PAX4O43316 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAX4O43316 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAX4O43316 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.17■□□□□ 0.34
PAX4O43316 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PAX4O43316 ECEL1P2-201ENST00000461596 1295 ntBASIC17.17■□□□□ 0.34
PAX4O43316 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PAX4O43316 AL157400.5-201ENST00000507624 621 ntBASIC17.17■□□□□ 0.34
PAX4O43316 AC092296.2-201ENST00000589470 999 ntBASIC17.17■□□□□ 0.34
PAX4O43316 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAX4O43316 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.17■□□□□ 0.34
PAX4O43316 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAX4O43316 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAX4O43316 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
PAX4O43316 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PAX4O43316 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.16■□□□□ 0.34
PAX4O43316 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PAX4O43316 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAX4O43316 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.16■□□□□ 0.34
PAX4O43316 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.16■□□□□ 0.34
PAX4O43316 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.16■□□□□ 0.34
PAX4O43316 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.16■□□□□ 0.34
PAX4O43316 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAX4O43316 SMPD5-203ENST00000639008 1464 ntBASIC17.16■□□□□ 0.34
PAX4O43316 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.16■□□□□ 0.34
PAX4O43316 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PAX4O43316 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms