Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CSNK1G3Q9Y6M4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CSNK1G3Q9Y6M4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.51■■□□□ 1.51
CSNK1G3Q9Y6M4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CSNK1G3Q9Y6M4 AL359258.2-201ENST00000564063 1566 ntBASIC24.5■■□□□ 1.51
CSNK1G3Q9Y6M4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CSNK1G3Q9Y6M4 ABCB10P3-201ENST00000561950 2166 ntBASIC24.5■■□□□ 1.51
CSNK1G3Q9Y6M4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CSNK1G3Q9Y6M4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CSNK1G3Q9Y6M4 AL139393.2-201ENST00000608721 2025 ntBASIC24.49■■□□□ 1.51
CSNK1G3Q9Y6M4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CSNK1G3Q9Y6M4 ATP5G2P3-201ENST00000429083 425 ntBASIC24.49■■□□□ 1.51
CSNK1G3Q9Y6M4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.49■■□□□ 1.51
CSNK1G3Q9Y6M4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CSNK1G3Q9Y6M4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CSNK1G3Q9Y6M4 AC004987.1-201ENST00000428627 508 ntBASIC24.48■■□□□ 1.51
CSNK1G3Q9Y6M4 SMPD5-203ENST00000639008 1464 ntBASIC24.48■■□□□ 1.51
CSNK1G3Q9Y6M4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CSNK1G3Q9Y6M4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CSNK1G3Q9Y6M4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.47■■□□□ 1.51
CSNK1G3Q9Y6M4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CSNK1G3Q9Y6M4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CSNK1G3Q9Y6M4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.46■■□□□ 1.51
CSNK1G3Q9Y6M4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CSNK1G3Q9Y6M4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CSNK1G3Q9Y6M4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.46■■□□□ 1.51
CSNK1G3Q9Y6M4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CSNK1G3Q9Y6M4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CSNK1G3Q9Y6M4 AP002414.2-202ENST00000590929 1450 ntBASIC24.45■■□□□ 1.51
CSNK1G3Q9Y6M4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CSNK1G3Q9Y6M4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CSNK1G3Q9Y6M4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.45■■□□□ 1.5
CSNK1G3Q9Y6M4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CSNK1G3Q9Y6M4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CSNK1G3Q9Y6M4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CSNK1G3Q9Y6M4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.44■■□□□ 1.5
CSNK1G3Q9Y6M4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CSNK1G3Q9Y6M4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CSNK1G3Q9Y6M4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CSNK1G3Q9Y6M4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.44■■□□□ 1.5
CSNK1G3Q9Y6M4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.44■■□□□ 1.5
CSNK1G3Q9Y6M4 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.44■■□□□ 1.5
CSNK1G3Q9Y6M4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CSNK1G3Q9Y6M4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CSNK1G3Q9Y6M4 AC025884.2-201ENST00000553429 711 ntBASIC24.42■■□□□ 1.5
CSNK1G3Q9Y6M4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSNK1G3Q9Y6M4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 AC133552.2-201ENST00000619106 1032 ntBASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CSNK1G3Q9Y6M4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
CSNK1G3Q9Y6M4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.4■■□□□ 1.5
CSNK1G3Q9Y6M4 AC009831.1-201ENST00000580420 1582 ntBASIC24.4■■□□□ 1.5
CSNK1G3Q9Y6M4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.4■■□□□ 1.5
CSNK1G3Q9Y6M4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CSNK1G3Q9Y6M4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CSNK1G3Q9Y6M4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
CSNK1G3Q9Y6M4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSNK1G3Q9Y6M4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSNK1G3Q9Y6M4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.39■■□□□ 1.49
CSNK1G3Q9Y6M4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSNK1G3Q9Y6M4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSNK1G3Q9Y6M4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.38■■□□□ 1.49
CSNK1G3Q9Y6M4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSNK1G3Q9Y6M4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSNK1G3Q9Y6M4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSNK1G3Q9Y6M4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSNK1G3Q9Y6M4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSNK1G3Q9Y6M4 AC129492.7-201ENST00000622992 756 ntBASIC24.38■■□□□ 1.49
CSNK1G3Q9Y6M4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.38■■□□□ 1.49
CSNK1G3Q9Y6M4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.37■■□□□ 1.49
CSNK1G3Q9Y6M4 AL592293.1-201ENST00000502889 1188 ntBASIC24.37■■□□□ 1.49
CSNK1G3Q9Y6M4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.37■■□□□ 1.49
CSNK1G3Q9Y6M4 AC139426.1-201ENST00000568218 2529 ntBASIC24.36■■□□□ 1.49
CSNK1G3Q9Y6M4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CSNK1G3Q9Y6M4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSNK1G3Q9Y6M4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSNK1G3Q9Y6M4 AC026202.3-201ENST00000600805 1127 ntBASIC24.36■■□□□ 1.49
CSNK1G3Q9Y6M4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSNK1G3Q9Y6M4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSNK1G3Q9Y6M4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CSNK1G3Q9Y6M4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSNK1G3Q9Y6M4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSNK1G3Q9Y6M4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSNK1G3Q9Y6M4 RP9P-202ENST00000450133 1212 ntBASIC24.35■■□□□ 1.49
CSNK1G3Q9Y6M4 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.35■■□□□ 1.49
CSNK1G3Q9Y6M4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CSNK1G3Q9Y6M4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSNK1G3Q9Y6M4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
CSNK1G3Q9Y6M4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CSNK1G3Q9Y6M4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.34■■□□□ 1.49
CSNK1G3Q9Y6M4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CSNK1G3Q9Y6M4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.34■■□□□ 1.49
CSNK1G3Q9Y6M4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms