Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.79■□□□□ 0.92
SSBP3Q9BWW4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSBP3Q9BWW4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSBP3Q9BWW4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.78■□□□□ 0.92
SSBP3Q9BWW4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSBP3Q9BWW4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.78■□□□□ 0.92
SSBP3Q9BWW4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSBP3Q9BWW4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSBP3Q9BWW4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSBP3Q9BWW4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSBP3Q9BWW4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSBP3Q9BWW4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SSBP3Q9BWW4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSBP3Q9BWW4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.76■□□□□ 0.91
SSBP3Q9BWW4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSBP3Q9BWW4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSBP3Q9BWW4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.76■□□□□ 0.91
SSBP3Q9BWW4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSBP3Q9BWW4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SSBP3Q9BWW4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSBP3Q9BWW4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSBP3Q9BWW4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSBP3Q9BWW4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SSBP3Q9BWW4 AC018358.1-201ENST00000631079 1402 ntBASIC20.75■□□□□ 0.91
SSBP3Q9BWW4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSBP3Q9BWW4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.74■□□□□ 0.91
SSBP3Q9BWW4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SSBP3Q9BWW4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSBP3Q9BWW4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSBP3Q9BWW4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSBP3Q9BWW4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.74■□□□□ 0.91
SSBP3Q9BWW4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.73■□□□□ 0.91
SSBP3Q9BWW4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSBP3Q9BWW4 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.73■□□□□ 0.91
SSBP3Q9BWW4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSBP3Q9BWW4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSBP3Q9BWW4 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.73■□□□□ 0.91
SSBP3Q9BWW4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SSBP3Q9BWW4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSBP3Q9BWW4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.72■□□□□ 0.91
SSBP3Q9BWW4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSBP3Q9BWW4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSBP3Q9BWW4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSBP3Q9BWW4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.71■□□□□ 0.91
SSBP3Q9BWW4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSBP3Q9BWW4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSBP3Q9BWW4 DRD5P2-201ENST00000421395 2012 ntBASIC20.7■□□□□ 0.9
SSBP3Q9BWW4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSBP3Q9BWW4 ABHD17AP5-201ENST00000580133 923 ntBASIC20.7■□□□□ 0.9
SSBP3Q9BWW4 AL359258.2-201ENST00000564063 1566 ntBASIC20.7■□□□□ 0.9
SSBP3Q9BWW4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.7■□□□□ 0.9
SSBP3Q9BWW4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSBP3Q9BWW4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSBP3Q9BWW4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSBP3Q9BWW4 AC092296.2-201ENST00000589470 999 ntBASIC20.69■□□□□ 0.9
SSBP3Q9BWW4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SSBP3Q9BWW4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSBP3Q9BWW4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.68■□□□□ 0.9
SSBP3Q9BWW4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSBP3Q9BWW4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.68■□□□□ 0.9
SSBP3Q9BWW4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SSBP3Q9BWW4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSBP3Q9BWW4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.67■□□□□ 0.9
SSBP3Q9BWW4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SSBP3Q9BWW4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.67■□□□□ 0.9
SSBP3Q9BWW4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSBP3Q9BWW4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSBP3Q9BWW4 ECEL1P2-201ENST00000461596 1295 ntBASIC20.66■□□□□ 0.9
SSBP3Q9BWW4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SSBP3Q9BWW4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SSBP3Q9BWW4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.65■□□□□ 0.9
SSBP3Q9BWW4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSBP3Q9BWW4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSBP3Q9BWW4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSBP3Q9BWW4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SSBP3Q9BWW4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSBP3Q9BWW4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSBP3Q9BWW4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.63■□□□□ 0.89
SSBP3Q9BWW4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.63■□□□□ 0.89
SSBP3Q9BWW4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SSBP3Q9BWW4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSBP3Q9BWW4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.62■□□□□ 0.89
SSBP3Q9BWW4 AL157400.5-201ENST00000507624 621 ntBASIC20.62■□□□□ 0.89
SSBP3Q9BWW4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSBP3Q9BWW4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSBP3Q9BWW4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SSBP3Q9BWW4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.61■□□□□ 0.89
SSBP3Q9BWW4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.61■□□□□ 0.89
SSBP3Q9BWW4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.61■□□□□ 0.89
SSBP3Q9BWW4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSBP3Q9BWW4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSBP3Q9BWW4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SSBP3Q9BWW4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.6■□□□□ 0.89
SSBP3Q9BWW4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSBP3Q9BWW4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSBP3Q9BWW4 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.59■□□□□ 0.89
SSBP3Q9BWW4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSBP3Q9BWW4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SSBP3Q9BWW4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSBP3Q9BWW4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms