Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
MS4A4EQ96PG1 AC008813.1-201ENST00000536597 885 ntBASIC23.29■■□□□ 1.32
MS4A4EQ96PG1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
MS4A4EQ96PG1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
MS4A4EQ96PG1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MS4A4EQ96PG1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MS4A4EQ96PG1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
MS4A4EQ96PG1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MS4A4EQ96PG1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
MS4A4EQ96PG1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.27■■□□□ 1.32
MS4A4EQ96PG1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MS4A4EQ96PG1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
MS4A4EQ96PG1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MS4A4EQ96PG1 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.27■■□□□ 1.32
MS4A4EQ96PG1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.27■■□□□ 1.32
MS4A4EQ96PG1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MS4A4EQ96PG1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
MS4A4EQ96PG1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
MS4A4EQ96PG1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
MS4A4EQ96PG1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
MS4A4EQ96PG1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MS4A4EQ96PG1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MS4A4EQ96PG1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MS4A4EQ96PG1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MS4A4EQ96PG1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MS4A4EQ96PG1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.24■■□□□ 1.31
MS4A4EQ96PG1 CR559946.2-201ENST00000623684 991 ntBASIC23.24■■□□□ 1.31
MS4A4EQ96PG1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MS4A4EQ96PG1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
MS4A4EQ96PG1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.23■■□□□ 1.31
MS4A4EQ96PG1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.23■■□□□ 1.31
MS4A4EQ96PG1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
MS4A4EQ96PG1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MS4A4EQ96PG1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MS4A4EQ96PG1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.22■■□□□ 1.31
MS4A4EQ96PG1 AL449106.1-201ENST00000608517 1980 ntBASIC23.22■■□□□ 1.31
MS4A4EQ96PG1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MS4A4EQ96PG1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MS4A4EQ96PG1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
MS4A4EQ96PG1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 WHAMMP3-201ENST00000611636 1609 ntBASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MS4A4EQ96PG1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MS4A4EQ96PG1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MS4A4EQ96PG1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.2■■□□□ 1.3
MS4A4EQ96PG1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
MS4A4EQ96PG1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.2■■□□□ 1.3
MS4A4EQ96PG1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.2■■□□□ 1.3
MS4A4EQ96PG1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
MS4A4EQ96PG1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MS4A4EQ96PG1 AC148477.6-201ENST00000623746 465 ntBASIC23.19■■□□□ 1.3
MS4A4EQ96PG1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
MS4A4EQ96PG1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MS4A4EQ96PG1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
MS4A4EQ96PG1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MS4A4EQ96PG1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
MS4A4EQ96PG1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MS4A4EQ96PG1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.17■■□□□ 1.3
MS4A4EQ96PG1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
MS4A4EQ96PG1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.17■■□□□ 1.3
MS4A4EQ96PG1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.17■■□□□ 1.3
MS4A4EQ96PG1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MS4A4EQ96PG1 MIR219A2-201ENST00000608502 1504 ntBASIC23.17■■□□□ 1.3
MS4A4EQ96PG1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MS4A4EQ96PG1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MS4A4EQ96PG1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.16■■□□□ 1.3
MS4A4EQ96PG1 MIR3648-2-201ENST00000581792 180 ntBASIC23.16■■□□□ 1.3
MS4A4EQ96PG1 MIR3648-1-201ENST00000615959 180 ntBASIC23.16■■□□□ 1.3
MS4A4EQ96PG1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MS4A4EQ96PG1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
MS4A4EQ96PG1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.15■■□□□ 1.3
MS4A4EQ96PG1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MS4A4EQ96PG1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
MS4A4EQ96PG1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
MS4A4EQ96PG1 HLA-V-202ENST00000446817 847 ntBASIC23.14■■□□□ 1.29
MS4A4EQ96PG1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
MS4A4EQ96PG1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MS4A4EQ96PG1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.14■■□□□ 1.29
MS4A4EQ96PG1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.13■■□□□ 1.29
MS4A4EQ96PG1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MS4A4EQ96PG1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MS4A4EQ96PG1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
MS4A4EQ96PG1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.13■■□□□ 1.29
MS4A4EQ96PG1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
MS4A4EQ96PG1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MS4A4EQ96PG1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
MS4A4EQ96PG1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.12■■□□□ 1.29
MS4A4EQ96PG1 MIR7108-201ENST00000614319 87 ntBASIC23.12■■□□□ 1.29
MS4A4EQ96PG1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
MS4A4EQ96PG1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.12■■□□□ 1.29
MS4A4EQ96PG1 AP004609.3-201ENST00000610705 1884 ntBASIC23.11■■□□□ 1.29
MS4A4EQ96PG1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms