Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.65■■□□□ 1.54
CPNE9Q8IYJ1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.65■■□□□ 1.54
CPNE9Q8IYJ1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.65■■□□□ 1.54
CPNE9Q8IYJ1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.64■■□□□ 1.54
CPNE9Q8IYJ1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CPNE9Q8IYJ1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
CPNE9Q8IYJ1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CPNE9Q8IYJ1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.64■■□□□ 1.54
CPNE9Q8IYJ1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPNE9Q8IYJ1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.64■■□□□ 1.53
CPNE9Q8IYJ1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CPNE9Q8IYJ1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.63■■□□□ 1.53
CPNE9Q8IYJ1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CPNE9Q8IYJ1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPNE9Q8IYJ1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CPNE9Q8IYJ1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.62■■□□□ 1.53
CPNE9Q8IYJ1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.62■■□□□ 1.53
CPNE9Q8IYJ1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CPNE9Q8IYJ1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.61■■□□□ 1.53
CPNE9Q8IYJ1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CPNE9Q8IYJ1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CPNE9Q8IYJ1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPNE9Q8IYJ1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CPNE9Q8IYJ1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CPNE9Q8IYJ1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.6■■□□□ 1.53
CPNE9Q8IYJ1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CPNE9Q8IYJ1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CPNE9Q8IYJ1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CPNE9Q8IYJ1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CPNE9Q8IYJ1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
CPNE9Q8IYJ1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CPNE9Q8IYJ1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CPNE9Q8IYJ1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CPNE9Q8IYJ1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CPNE9Q8IYJ1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
CPNE9Q8IYJ1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CPNE9Q8IYJ1 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.57■■□□□ 1.52
CPNE9Q8IYJ1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.57■■□□□ 1.52
CPNE9Q8IYJ1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
CPNE9Q8IYJ1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.56■■□□□ 1.52
CPNE9Q8IYJ1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
CPNE9Q8IYJ1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.56■■□□□ 1.52
CPNE9Q8IYJ1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CPNE9Q8IYJ1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE9Q8IYJ1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE9Q8IYJ1 CR559946.2-201ENST00000623684 991 ntBASIC24.55■■□□□ 1.52
CPNE9Q8IYJ1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE9Q8IYJ1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE9Q8IYJ1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CPNE9Q8IYJ1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CPNE9Q8IYJ1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
CPNE9Q8IYJ1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CPNE9Q8IYJ1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CPNE9Q8IYJ1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPNE9Q8IYJ1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.53■■□□□ 1.52
CPNE9Q8IYJ1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CPNE9Q8IYJ1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CPNE9Q8IYJ1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPNE9Q8IYJ1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CPNE9Q8IYJ1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.52■■□□□ 1.52
CPNE9Q8IYJ1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.52■■□□□ 1.52
CPNE9Q8IYJ1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CPNE9Q8IYJ1 AL449106.1-201ENST00000608517 1980 ntBASIC24.52■■□□□ 1.52
CPNE9Q8IYJ1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CPNE9Q8IYJ1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.51■■□□□ 1.51
CPNE9Q8IYJ1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.51■■□□□ 1.51
CPNE9Q8IYJ1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CPNE9Q8IYJ1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.51■■□□□ 1.51
CPNE9Q8IYJ1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
CPNE9Q8IYJ1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE9Q8IYJ1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.5■■□□□ 1.51
CPNE9Q8IYJ1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE9Q8IYJ1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.5■■□□□ 1.51
CPNE9Q8IYJ1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPNE9Q8IYJ1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CPNE9Q8IYJ1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CPNE9Q8IYJ1 AC008813.1-201ENST00000536597 885 ntBASIC24.49■■□□□ 1.51
CPNE9Q8IYJ1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CPNE9Q8IYJ1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CPNE9Q8IYJ1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CPNE9Q8IYJ1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
CPNE9Q8IYJ1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE9Q8IYJ1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CPNE9Q8IYJ1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.47■■□□□ 1.51
CPNE9Q8IYJ1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CPNE9Q8IYJ1 HLA-V-202ENST00000446817 847 ntBASIC24.47■■□□□ 1.51
CPNE9Q8IYJ1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CPNE9Q8IYJ1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.47■■□□□ 1.51
CPNE9Q8IYJ1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CPNE9Q8IYJ1 WHAMMP3-201ENST00000611636 1609 ntBASIC24.46■■□□□ 1.51
CPNE9Q8IYJ1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CPNE9Q8IYJ1 MIR3648-2-201ENST00000581792 180 ntBASIC24.46■■□□□ 1.51
CPNE9Q8IYJ1 MIR3648-1-201ENST00000615959 180 ntBASIC24.46■■□□□ 1.51
CPNE9Q8IYJ1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.46■■□□□ 1.51
CPNE9Q8IYJ1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CPNE9Q8IYJ1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.46■■□□□ 1.51
CPNE9Q8IYJ1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CPNE9Q8IYJ1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CPNE9Q8IYJ1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CPNE9Q8IYJ1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 269.3 ms