Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SLC6A4P31645 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.87■■□□□ 1.73
SLC6A4P31645 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLC6A4P31645 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.86■■□□□ 1.73
SLC6A4P31645 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.86■■□□□ 1.73
SLC6A4P31645 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.85■■□□□ 1.73
SLC6A4P31645 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC6A4P31645 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.85■■□□□ 1.73
SLC6A4P31645 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SLC6A4P31645 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC6A4P31645 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.85■■□□□ 1.73
SLC6A4P31645 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC6A4P31645 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.84■■□□□ 1.73
SLC6A4P31645 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC6A4P31645 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
SLC6A4P31645 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SLC6A4P31645 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.83■■□□□ 1.73
SLC6A4P31645 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC6A4P31645 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SLC6A4P31645 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.82■■□□□ 1.72
SLC6A4P31645 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SLC6A4P31645 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC6A4P31645 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC6A4P31645 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC6A4P31645 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC6A4P31645 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC6A4P31645 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.8■■□□□ 1.72
SLC6A4P31645 RNF126P1-201ENST00000567452 1320 ntBASIC25.8■■□□□ 1.72
SLC6A4P31645 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A4P31645 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A4P31645 RARRES2P2-201ENST00000394842 485 ntBASIC25.79■■□□□ 1.72
SLC6A4P31645 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SLC6A4P31645 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SLC6A4P31645 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
SLC6A4P31645 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
SLC6A4P31645 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SLC6A4P31645 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
SLC6A4P31645 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SLC6A4P31645 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
SLC6A4P31645 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SLC6A4P31645 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SLC6A4P31645 AL359258.2-201ENST00000564063 1566 ntBASIC25.75■■□□□ 1.71
SLC6A4P31645 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SLC6A4P31645 AC126177.7-201ENST00000547904 679 ntBASIC25.75■■□□□ 1.71
SLC6A4P31645 AC092296.2-201ENST00000589470 999 ntBASIC25.75■■□□□ 1.71
SLC6A4P31645 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SLC6A4P31645 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SLC6A4P31645 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
SLC6A4P31645 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SLC6A4P31645 AL157400.5-201ENST00000507624 621 ntBASIC25.73■■□□□ 1.71
SLC6A4P31645 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.72■■□□□ 1.71
SLC6A4P31645 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SLC6A4P31645 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.72■■□□□ 1.71
SLC6A4P31645 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.72■■□□□ 1.71
SLC6A4P31645 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.72■■□□□ 1.71
SLC6A4P31645 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SLC6A4P31645 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
SLC6A4P31645 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.71■■□□□ 1.71
SLC6A4P31645 LINC01003-201ENST00000564834 1764 ntBASIC25.71■■□□□ 1.71
SLC6A4P31645 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SLC6A4P31645 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
SLC6A4P31645 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SLC6A4P31645 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SLC6A4P31645 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SLC6A4P31645 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SLC6A4P31645 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SLC6A4P31645 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.68■■□□□ 1.7
SLC6A4P31645 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLC6A4P31645 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.68■■□□□ 1.7
SLC6A4P31645 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SLC6A4P31645 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.68■■□□□ 1.7
SLC6A4P31645 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SLC6A4P31645 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.68■■□□□ 1.7
SLC6A4P31645 AC142086.6-201ENST00000621154 1765 ntBASIC25.67■■□□□ 1.7
SLC6A4P31645 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.66■■□□□ 1.7
SLC6A4P31645 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.66■■□□□ 1.7
SLC6A4P31645 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
SLC6A4P31645 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A4P31645 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A4P31645 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A4P31645 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.65■■□□□ 1.7
SLC6A4P31645 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SLC6A4P31645 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A4P31645 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A4P31645 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.64■■□□□ 1.7
SLC6A4P31645 ECEL1P2-201ENST00000461596 1295 ntBASIC25.64■■□□□ 1.7
SLC6A4P31645 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
SLC6A4P31645 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SLC6A4P31645 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
SLC6A4P31645 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.63■■□□□ 1.69
SLC6A4P31645 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.63■■□□□ 1.69
SLC6A4P31645 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SLC6A4P31645 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC6A4P31645 WHAMMP3-201ENST00000611636 1609 ntBASIC25.63■■□□□ 1.69
SLC6A4P31645 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SLC6A4P31645 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.62■■□□□ 1.69
SLC6A4P31645 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC6A4P31645 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC6A4P31645 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC6A4P31645 ABHD17AP5-201ENST00000580133 923 ntBASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms