Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 RARRES2P2-201ENST00000394842 485 ntBASIC22.41■■□□□ 1.18
CNEP1R1Q8N9A8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNEP1R1Q8N9A8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNEP1R1Q8N9A8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
CNEP1R1Q8N9A8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CNEP1R1Q8N9A8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CNEP1R1Q8N9A8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CNEP1R1Q8N9A8 RNF126P1-201ENST00000567452 1320 ntBASIC22.39■■□□□ 1.18
CNEP1R1Q8N9A8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CNEP1R1Q8N9A8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CNEP1R1Q8N9A8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CNEP1R1Q8N9A8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.38■■□□□ 1.17
CNEP1R1Q8N9A8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CNEP1R1Q8N9A8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.38■■□□□ 1.17
CNEP1R1Q8N9A8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CNEP1R1Q8N9A8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CNEP1R1Q8N9A8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CNEP1R1Q8N9A8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.37■■□□□ 1.17
CNEP1R1Q8N9A8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CNEP1R1Q8N9A8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CNEP1R1Q8N9A8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.37■■□□□ 1.17
CNEP1R1Q8N9A8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CNEP1R1Q8N9A8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CNEP1R1Q8N9A8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CNEP1R1Q8N9A8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.36■■□□□ 1.17
CNEP1R1Q8N9A8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
CNEP1R1Q8N9A8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.36■■□□□ 1.17
CNEP1R1Q8N9A8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.36■■□□□ 1.17
CNEP1R1Q8N9A8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CNEP1R1Q8N9A8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.36■■□□□ 1.17
CNEP1R1Q8N9A8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNEP1R1Q8N9A8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNEP1R1Q8N9A8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.35■■□□□ 1.17
CNEP1R1Q8N9A8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNEP1R1Q8N9A8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.34■■□□□ 1.17
CNEP1R1Q8N9A8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNEP1R1Q8N9A8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNEP1R1Q8N9A8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNEP1R1Q8N9A8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.32■■□□□ 1.16
CNEP1R1Q8N9A8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNEP1R1Q8N9A8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CNEP1R1Q8N9A8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.32■■□□□ 1.16
CNEP1R1Q8N9A8 AC126177.7-201ENST00000547904 679 ntBASIC22.32■■□□□ 1.16
CNEP1R1Q8N9A8 AC060814.1-201ENST00000554326 538 ntBASIC22.32■■□□□ 1.16
CNEP1R1Q8N9A8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.32■■□□□ 1.16
CNEP1R1Q8N9A8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.32■■□□□ 1.16
CNEP1R1Q8N9A8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNEP1R1Q8N9A8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CNEP1R1Q8N9A8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CNEP1R1Q8N9A8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CNEP1R1Q8N9A8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.3■■□□□ 1.16
CNEP1R1Q8N9A8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CNEP1R1Q8N9A8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CNEP1R1Q8N9A8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CNEP1R1Q8N9A8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNEP1R1Q8N9A8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CNEP1R1Q8N9A8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNEP1R1Q8N9A8 ABHD17AP5-201ENST00000580133 923 ntBASIC22.29■■□□□ 1.16
CNEP1R1Q8N9A8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CNEP1R1Q8N9A8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.29■■□□□ 1.16
CNEP1R1Q8N9A8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CNEP1R1Q8N9A8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CNEP1R1Q8N9A8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CNEP1R1Q8N9A8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.28■■□□□ 1.16
CNEP1R1Q8N9A8 AP002414.2-202ENST00000590929 1450 ntBASIC22.28■■□□□ 1.16
CNEP1R1Q8N9A8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 AC139426.1-201ENST00000568218 2529 ntBASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CNEP1R1Q8N9A8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNEP1R1Q8N9A8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNEP1R1Q8N9A8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.26■■□□□ 1.15
CNEP1R1Q8N9A8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNEP1R1Q8N9A8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CNEP1R1Q8N9A8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNEP1R1Q8N9A8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.25■■□□□ 1.15
CNEP1R1Q8N9A8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.25■■□□□ 1.15
CNEP1R1Q8N9A8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CNEP1R1Q8N9A8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNEP1R1Q8N9A8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNEP1R1Q8N9A8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNEP1R1Q8N9A8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
CNEP1R1Q8N9A8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CNEP1R1Q8N9A8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNEP1R1Q8N9A8 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.23■■□□□ 1.15
CNEP1R1Q8N9A8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CNEP1R1Q8N9A8 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.23■■□□□ 1.15
CNEP1R1Q8N9A8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNEP1R1Q8N9A8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CNEP1R1Q8N9A8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNEP1R1Q8N9A8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNEP1R1Q8N9A8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CNEP1R1Q8N9A8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms