Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.65■■□□□ 1.7
FNDC3BQ53EP0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.65■■□□□ 1.7
FNDC3BQ53EP0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
FNDC3BQ53EP0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
FNDC3BQ53EP0 AC126177.7-201ENST00000547904 679 ntBASIC25.63■■□□□ 1.69
FNDC3BQ53EP0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
FNDC3BQ53EP0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FNDC3BQ53EP0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
FNDC3BQ53EP0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3BQ53EP0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3BQ53EP0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3BQ53EP0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3BQ53EP0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
FNDC3BQ53EP0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
FNDC3BQ53EP0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.61■■□□□ 1.69
FNDC3BQ53EP0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
FNDC3BQ53EP0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
FNDC3BQ53EP0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.61■■□□□ 1.69
FNDC3BQ53EP0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
FNDC3BQ53EP0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.61■■□□□ 1.69
FNDC3BQ53EP0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
FNDC3BQ53EP0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
FNDC3BQ53EP0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
FNDC3BQ53EP0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
FNDC3BQ53EP0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
FNDC3BQ53EP0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
FNDC3BQ53EP0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
FNDC3BQ53EP0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.58■■□□□ 1.69
FNDC3BQ53EP0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
FNDC3BQ53EP0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.58■■□□□ 1.69
FNDC3BQ53EP0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
FNDC3BQ53EP0 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.57■■□□□ 1.68
FNDC3BQ53EP0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
FNDC3BQ53EP0 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.57■■□□□ 1.68
FNDC3BQ53EP0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.57■■□□□ 1.68
FNDC3BQ53EP0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
FNDC3BQ53EP0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
FNDC3BQ53EP0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
FNDC3BQ53EP0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
FNDC3BQ53EP0 AC092296.2-201ENST00000589470 999 ntBASIC25.55■■□□□ 1.68
FNDC3BQ53EP0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FNDC3BQ53EP0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
FNDC3BQ53EP0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
FNDC3BQ53EP0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
FNDC3BQ53EP0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
FNDC3BQ53EP0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
FNDC3BQ53EP0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.53■■□□□ 1.68
FNDC3BQ53EP0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
FNDC3BQ53EP0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
FNDC3BQ53EP0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
FNDC3BQ53EP0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.52■■□□□ 1.68
FNDC3BQ53EP0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.52■■□□□ 1.68
FNDC3BQ53EP0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
FNDC3BQ53EP0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.51■■□□□ 1.67
FNDC3BQ53EP0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.51■■□□□ 1.67
FNDC3BQ53EP0 NTF6A-201ENST00000591175 560 ntBASIC25.51■■□□□ 1.67
FNDC3BQ53EP0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
FNDC3BQ53EP0 AP002414.2-202ENST00000590929 1450 ntBASIC25.51■■□□□ 1.67
FNDC3BQ53EP0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
FNDC3BQ53EP0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
FNDC3BQ53EP0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
FNDC3BQ53EP0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
FNDC3BQ53EP0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.5■■□□□ 1.67
FNDC3BQ53EP0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
FNDC3BQ53EP0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.5■■□□□ 1.67
FNDC3BQ53EP0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
FNDC3BQ53EP0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.49■■□□□ 1.67
FNDC3BQ53EP0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
FNDC3BQ53EP0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
FNDC3BQ53EP0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
FNDC3BQ53EP0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
FNDC3BQ53EP0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
FNDC3BQ53EP0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
FNDC3BQ53EP0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
FNDC3BQ53EP0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.47■■□□□ 1.67
FNDC3BQ53EP0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
FNDC3BQ53EP0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.47■■□□□ 1.67
FNDC3BQ53EP0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
FNDC3BQ53EP0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
FNDC3BQ53EP0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
FNDC3BQ53EP0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
FNDC3BQ53EP0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
FNDC3BQ53EP0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
FNDC3BQ53EP0 AL359258.2-201ENST00000564063 1566 ntBASIC25.46■■□□□ 1.67
FNDC3BQ53EP0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
FNDC3BQ53EP0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
FNDC3BQ53EP0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
FNDC3BQ53EP0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
FNDC3BQ53EP0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.45■■□□□ 1.66
FNDC3BQ53EP0 AL157400.5-201ENST00000507624 621 ntBASIC25.45■■□□□ 1.66
FNDC3BQ53EP0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.45■■□□□ 1.66
FNDC3BQ53EP0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.45■■□□□ 1.66
FNDC3BQ53EP0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
FNDC3BQ53EP0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.44■■□□□ 1.66
FNDC3BQ53EP0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.44■■□□□ 1.66
FNDC3BQ53EP0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.44■■□□□ 1.66
FNDC3BQ53EP0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
FNDC3BQ53EP0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
FNDC3BQ53EP0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
FNDC3BQ53EP0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms