Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.06■■■■□ 3.2
FNDC3BQ53EP0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.18■■■■□ 3.06
FNDC3BQ53EP0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
FNDC3BQ53EP0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
FNDC3BQ53EP0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
FNDC3BQ53EP0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.92■■■■□ 3.02
FNDC3BQ53EP0 AL356512.1-201ENST00000607453 1739 ntBASIC33.78■■■■□ 3
FNDC3BQ53EP0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.6■■■□□ 2.97
FNDC3BQ53EP0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.95■■■□□ 2.87
FNDC3BQ53EP0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.89■■■□□ 2.86
FNDC3BQ53EP0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
FNDC3BQ53EP0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
FNDC3BQ53EP0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.73■■■□□ 2.83
FNDC3BQ53EP0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.67■■■□□ 2.82
FNDC3BQ53EP0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.65■■■□□ 2.82
FNDC3BQ53EP0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.63■■■□□ 2.81
FNDC3BQ53EP0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
FNDC3BQ53EP0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.45■■■□□ 2.79
FNDC3BQ53EP0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
FNDC3BQ53EP0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
FNDC3BQ53EP0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
FNDC3BQ53EP0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
FNDC3BQ53EP0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
FNDC3BQ53EP0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.88■■■□□ 2.69
FNDC3BQ53EP0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
FNDC3BQ53EP0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
FNDC3BQ53EP0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.71■■■□□ 2.67
FNDC3BQ53EP0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
FNDC3BQ53EP0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
FNDC3BQ53EP0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
FNDC3BQ53EP0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.53■■■□□ 2.64
FNDC3BQ53EP0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
FNDC3BQ53EP0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
FNDC3BQ53EP0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
FNDC3BQ53EP0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.27■■■□□ 2.6
FNDC3BQ53EP0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
FNDC3BQ53EP0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
FNDC3BQ53EP0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
FNDC3BQ53EP0 AC015813.7-201ENST00000623294 581 ntBASIC31.09■■■□□ 2.57
FNDC3BQ53EP0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.03■■■□□ 2.56
FNDC3BQ53EP0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.02■■■□□ 2.56
FNDC3BQ53EP0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
FNDC3BQ53EP0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
FNDC3BQ53EP0 AC006077.2-201ENST00000623591 457 ntBASIC30.93■■■□□ 2.54
FNDC3BQ53EP0 ZNRF2P1-201ENST00000441407 443 ntBASIC30.86■■■□□ 2.53
FNDC3BQ53EP0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
FNDC3BQ53EP0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
FNDC3BQ53EP0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.76■■■□□ 2.51
FNDC3BQ53EP0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.75■■■□□ 2.51
FNDC3BQ53EP0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.69■■■□□ 2.5
FNDC3BQ53EP0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
FNDC3BQ53EP0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.66■■■□□ 2.5
FNDC3BQ53EP0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
FNDC3BQ53EP0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.55■■■□□ 2.48
FNDC3BQ53EP0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
FNDC3BQ53EP0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
FNDC3BQ53EP0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
FNDC3BQ53EP0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
FNDC3BQ53EP0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
FNDC3BQ53EP0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
FNDC3BQ53EP0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
FNDC3BQ53EP0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
FNDC3BQ53EP0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.29■■■□□ 2.44
FNDC3BQ53EP0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
FNDC3BQ53EP0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
FNDC3BQ53EP0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
FNDC3BQ53EP0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
FNDC3BQ53EP0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.14■■■□□ 2.42
FNDC3BQ53EP0 AP002365.1-201ENST00000603448 772 ntBASIC30.13■■■□□ 2.41
FNDC3BQ53EP0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
FNDC3BQ53EP0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
FNDC3BQ53EP0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
FNDC3BQ53EP0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
FNDC3BQ53EP0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
FNDC3BQ53EP0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.97■■■□□ 2.39
FNDC3BQ53EP0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.95■■■□□ 2.39
FNDC3BQ53EP0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.95■■■□□ 2.39
FNDC3BQ53EP0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.93■■■□□ 2.38
FNDC3BQ53EP0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.92■■■□□ 2.38
FNDC3BQ53EP0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.92■■■□□ 2.38
FNDC3BQ53EP0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
FNDC3BQ53EP0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.89■■■□□ 2.38
FNDC3BQ53EP0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
FNDC3BQ53EP0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.85■■■□□ 2.37
FNDC3BQ53EP0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
FNDC3BQ53EP0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
FNDC3BQ53EP0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.82■■■□□ 2.36
FNDC3BQ53EP0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
FNDC3BQ53EP0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.78■■■□□ 2.36
FNDC3BQ53EP0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
FNDC3BQ53EP0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
FNDC3BQ53EP0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.74■■■□□ 2.35
FNDC3BQ53EP0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
FNDC3BQ53EP0 DYNLL1-208ENST00000550178 581 ntBASIC29.73■■■□□ 2.35
FNDC3BQ53EP0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
FNDC3BQ53EP0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
FNDC3BQ53EP0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.65■■■□□ 2.34
FNDC3BQ53EP0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
FNDC3BQ53EP0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
FNDC3BQ53EP0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms