Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
PCF11O94913 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC39.96■■■■□ 3.99
PCF11O94913 HES4-202ENST00000428771 1040 ntTSL 2 BASIC39.96■■■■□ 3.99
PCF11O94913 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC39.95■■■■□ 3.99
PCF11O94913 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC39.94■■■■□ 3.98
PCF11O94913 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
PCF11O94913 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC39.93■■■■□ 3.98
PCF11O94913 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC39.92■■■■□ 3.98
PCF11O94913 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC39.91■■■■□ 3.98
PCF11O94913 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC39.91■■■■□ 3.98
PCF11O94913 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC39.9■■■■□ 3.98
PCF11O94913 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
PCF11O94913 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC39.9■■■■□ 3.98
PCF11O94913 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC39.9■■■■□ 3.98
PCF11O94913 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
PCF11O94913 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC39.89■■■■□ 3.98
PCF11O94913 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
PCF11O94913 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC39.89■■■■□ 3.98
PCF11O94913 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC39.88■■■■□ 3.97
PCF11O94913 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC39.88■■■■□ 3.97
PCF11O94913 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
PCF11O94913 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC39.88■■■■□ 3.97
PCF11O94913 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC39.88■■■■□ 3.97
PCF11O94913 AL139393.2-201ENST00000608721 2025 ntBASIC39.87■■■■□ 3.97
PCF11O94913 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC39.87■■■■□ 3.97
PCF11O94913 HYI-213ENST00000583037 1322 ntTSL 5 BASIC39.85■■■■□ 3.97
PCF11O94913 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC39.85■■■■□ 3.97
PCF11O94913 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
PCF11O94913 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC39.84■■■■□ 3.97
PCF11O94913 U85056.1-201ENST00000616429 682 ntBASIC39.84■■■■□ 3.97
PCF11O94913 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
PCF11O94913 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC39.83■■■■□ 3.97
PCF11O94913 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC39.82■■■■□ 3.97
PCF11O94913 AC018358.1-201ENST00000631079 1402 ntBASIC39.82■■■■□ 3.97
PCF11O94913 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC39.82■■■■□ 3.97
PCF11O94913 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC39.81■■■■□ 3.96
PCF11O94913 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
PCF11O94913 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC39.8■■■■□ 3.96
PCF11O94913 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
PCF11O94913 AC019069.1-201ENST00000610008 1333 ntBASIC39.8■■■■□ 3.96
PCF11O94913 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC39.79■■■■□ 3.96
PCF11O94913 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC39.79■■■■□ 3.96
PCF11O94913 ABCB10P3-201ENST00000561950 2166 ntBASIC39.79■■■■□ 3.96
PCF11O94913 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC39.79■■■■□ 3.96
PCF11O94913 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC39.78■■■■□ 3.96
PCF11O94913 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
PCF11O94913 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
PCF11O94913 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC39.76■■■■□ 3.96
PCF11O94913 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC39.76■■■■□ 3.95
PCF11O94913 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC39.75■■■■□ 3.95
PCF11O94913 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC39.74■■■■□ 3.95
PCF11O94913 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
PCF11O94913 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC39.73■■■■□ 3.95
PCF11O94913 KRT18P60-201ENST00000312876 1297 ntBASIC39.73■■■■□ 3.95
PCF11O94913 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
PCF11O94913 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC39.73■■■■□ 3.95
PCF11O94913 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
PCF11O94913 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
PCF11O94913 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
PCF11O94913 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
PCF11O94913 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
PCF11O94913 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC39.7■■■■□ 3.95
PCF11O94913 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC39.7■■■■□ 3.95
PCF11O94913 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
PCF11O94913 AC126177.7-201ENST00000547904 679 ntBASIC39.7■■■■□ 3.95
PCF11O94913 GFER-205ENST00000569451 517 ntTSL 5 BASIC39.69■■■■□ 3.94
PCF11O94913 ST7-205ENST00000393446 2114 ntTSL 5 BASIC39.68■■■■□ 3.94
PCF11O94913 ECEL1P2-201ENST00000461596 1295 ntBASIC39.68■■■■□ 3.94
PCF11O94913 ABCB10P1-201ENST00000614297 2181 ntBASIC39.68■■■■□ 3.94
PCF11O94913 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
PCF11O94913 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
PCF11O94913 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC39.66■■■■□ 3.94
PCF11O94913 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
PCF11O94913 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC39.66■■■■□ 3.94
PCF11O94913 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC39.65■■■■□ 3.94
PCF11O94913 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC39.64■■■■□ 3.94
PCF11O94913 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC39.64■■■■□ 3.94
PCF11O94913 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC39.64■■■■□ 3.94
PCF11O94913 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
PCF11O94913 AC007029.1-201ENST00000604183 313 ntBASIC39.64■■■■□ 3.94
PCF11O94913 AP002414.2-202ENST00000590929 1450 ntBASIC39.63■■■■□ 3.94
PCF11O94913 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC39.63■■■■□ 3.94
PCF11O94913 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC39.63■■■■□ 3.94
PCF11O94913 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC39.63■■■■□ 3.93
PCF11O94913 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC39.63■■■■□ 3.93
PCF11O94913 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC39.62■■■■□ 3.93
PCF11O94913 ST7-202ENST00000323984 2142 ntTSL 5 BASIC39.62■■■■□ 3.93
PCF11O94913 ST7-207ENST00000393449 2127 ntTSL 5 BASIC39.62■■■■□ 3.93
PCF11O94913 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
PCF11O94913 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
PCF11O94913 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
PCF11O94913 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC39.62■■■■□ 3.93
PCF11O94913 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
PCF11O94913 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC39.61■■■■□ 3.93
PCF11O94913 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
PCF11O94913 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC39.6■■■■□ 3.93
PCF11O94913 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC39.59■■■■□ 3.93
PCF11O94913 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
PCF11O94913 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC39.59■■■■□ 3.93
PCF11O94913 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms