Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPNE3O75131 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPNE3O75131 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.05■■□□□ 1.44
CPNE3O75131 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPNE3O75131 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.05■■□□□ 1.44
CPNE3O75131 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPNE3O75131 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPNE3O75131 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CPNE3O75131 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CPNE3O75131 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CPNE3O75131 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CPNE3O75131 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CPNE3O75131 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CPNE3O75131 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CPNE3O75131 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CPNE3O75131 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CPNE3O75131 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CPNE3O75131 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CPNE3O75131 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CPNE3O75131 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
CPNE3O75131 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24■■□□□ 1.43
CPNE3O75131 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24■■□□□ 1.43
CPNE3O75131 AC060814.1-201ENST00000554326 538 ntBASIC24■■□□□ 1.43
CPNE3O75131 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CPNE3O75131 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CPNE3O75131 ABCB10P3-201ENST00000561950 2166 ntBASIC23.99■■□□□ 1.43
CPNE3O75131 AC100797.4-201ENST00000631653 1827 ntBASIC23.98■■□□□ 1.43
CPNE3O75131 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE3O75131 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE3O75131 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE3O75131 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.98■■□□□ 1.43
CPNE3O75131 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.98■■□□□ 1.43
CPNE3O75131 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE3O75131 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CPNE3O75131 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.98■■□□□ 1.43
CPNE3O75131 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPNE3O75131 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CPNE3O75131 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.97■■□□□ 1.43
CPNE3O75131 AC126177.7-201ENST00000547904 679 ntBASIC23.97■■□□□ 1.43
CPNE3O75131 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CPNE3O75131 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPNE3O75131 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
CPNE3O75131 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CPNE3O75131 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CPNE3O75131 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPNE3O75131 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.95■■□□□ 1.42
CPNE3O75131 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPNE3O75131 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPNE3O75131 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CPNE3O75131 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPNE3O75131 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CPNE3O75131 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPNE3O75131 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPNE3O75131 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPNE3O75131 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.93■■□□□ 1.42
CPNE3O75131 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.93■■□□□ 1.42
CPNE3O75131 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.93■■□□□ 1.42
CPNE3O75131 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CPNE3O75131 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CPNE3O75131 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CPNE3O75131 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.91■■□□□ 1.42
CPNE3O75131 AL139393.2-201ENST00000608721 2025 ntBASIC23.91■■□□□ 1.42
CPNE3O75131 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CPNE3O75131 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.91■■□□□ 1.42
CPNE3O75131 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPNE3O75131 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CPNE3O75131 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CPNE3O75131 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.42
CPNE3O75131 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPNE3O75131 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPNE3O75131 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CPNE3O75131 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CPNE3O75131 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CPNE3O75131 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CPNE3O75131 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CPNE3O75131 AC092296.2-201ENST00000589470 999 ntBASIC23.88■■□□□ 1.41
CPNE3O75131 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CPNE3O75131 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPNE3O75131 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CPNE3O75131 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CPNE3O75131 NTF6A-201ENST00000591175 560 ntBASIC23.87■■□□□ 1.41
CPNE3O75131 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPNE3O75131 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
CPNE3O75131 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
CPNE3O75131 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE3O75131 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPNE3O75131 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CPNE3O75131 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.85■■□□□ 1.41
CPNE3O75131 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.85■■□□□ 1.41
CPNE3O75131 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.85■■□□□ 1.41
CPNE3O75131 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPNE3O75131 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CPNE3O75131 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.84■■□□□ 1.41
CPNE3O75131 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE3O75131 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.84■■□□□ 1.41
CPNE3O75131 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE3O75131 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPNE3O75131 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CPNE3O75131 ECEL1P2-201ENST00000461596 1295 ntBASIC23.83■■□□□ 1.41
CPNE3O75131 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms