Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
CPNE3O75131 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.98■■■□□ 2.71
CPNE3O75131 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CPNE3O75131 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CPNE3O75131 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CPNE3O75131 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CPNE3O75131 AL356512.1-201ENST00000607453 1739 ntBASIC31.46■■■□□ 2.63
CPNE3O75131 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
CPNE3O75131 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
CPNE3O75131 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
CPNE3O75131 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.64■■■□□ 2.5
CPNE3O75131 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
CPNE3O75131 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.55■■■□□ 2.48
CPNE3O75131 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.54■■■□□ 2.48
CPNE3O75131 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.48■■■□□ 2.47
CPNE3O75131 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.34■■■□□ 2.45
CPNE3O75131 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
CPNE3O75131 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.19■■■□□ 2.42
CPNE3O75131 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CPNE3O75131 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CPNE3O75131 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CPNE3O75131 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
CPNE3O75131 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
CPNE3O75131 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CPNE3O75131 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CPNE3O75131 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CPNE3O75131 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
CPNE3O75131 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.62■■■□□ 2.33
CPNE3O75131 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CPNE3O75131 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.57■■■□□ 2.32
CPNE3O75131 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
CPNE3O75131 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CPNE3O75131 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CPNE3O75131 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.41■■■□□ 2.3
CPNE3O75131 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CPNE3O75131 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CPNE3O75131 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.14■■■□□ 2.26
CPNE3O75131 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
CPNE3O75131 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CPNE3O75131 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CPNE3O75131 AC015813.7-201ENST00000623294 581 ntBASIC29.03■■■□□ 2.24
CPNE3O75131 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.02■■■□□ 2.24
CPNE3O75131 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.99■■■□□ 2.23
CPNE3O75131 AC006077.2-201ENST00000623591 457 ntBASIC28.96■■■□□ 2.23
CPNE3O75131 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CPNE3O75131 ZNRF2P1-201ENST00000441407 443 ntBASIC28.9■■■□□ 2.22
CPNE3O75131 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.89■■■□□ 2.21
CPNE3O75131 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
CPNE3O75131 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
CPNE3O75131 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CPNE3O75131 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CPNE3O75131 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.61■■■□□ 2.17
CPNE3O75131 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CPNE3O75131 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.56■■■□□ 2.16
CPNE3O75131 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.52■■■□□ 2.16
CPNE3O75131 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CPNE3O75131 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.49■■■□□ 2.15
CPNE3O75131 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
CPNE3O75131 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CPNE3O75131 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.42■■■□□ 2.14
CPNE3O75131 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
CPNE3O75131 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CPNE3O75131 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
CPNE3O75131 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CPNE3O75131 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CPNE3O75131 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CPNE3O75131 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CPNE3O75131 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CPNE3O75131 AP002365.1-201ENST00000603448 772 ntBASIC28.19■■■□□ 2.1
CPNE3O75131 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CPNE3O75131 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CPNE3O75131 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.16■■■□□ 2.1
CPNE3O75131 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.16■■■□□ 2.1
CPNE3O75131 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CPNE3O75131 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CPNE3O75131 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CPNE3O75131 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.02■■■□□ 2.08
CPNE3O75131 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
CPNE3O75131 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.99■■■□□ 2.07
CPNE3O75131 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.97■■■□□ 2.07
CPNE3O75131 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.95■■■□□ 2.06
CPNE3O75131 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CPNE3O75131 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.93■■■□□ 2.06
CPNE3O75131 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
CPNE3O75131 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.93■■■□□ 2.06
CPNE3O75131 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.91■■■□□ 2.06
CPNE3O75131 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
CPNE3O75131 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.87■■■□□ 2.05
CPNE3O75131 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.84■■■□□ 2.05
CPNE3O75131 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CPNE3O75131 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CPNE3O75131 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CPNE3O75131 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
CPNE3O75131 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.81■■■□□ 2.04
CPNE3O75131 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.78■■■□□ 2.04
CPNE3O75131 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CPNE3O75131 DYNLL1-208ENST00000550178 581 ntBASIC27.75■■■□□ 2.03
CPNE3O75131 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
CPNE3O75131 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
CPNE3O75131 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms